OpenStructure
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#include <ost/base.hh>
#include <ost/stdint.hh>
#include <ost/message.hh>
#include <ost/seq/module_config.hh>
#include <string.h>
#include <vector>
#include <map>
#include <fstream>
#include <boost/shared_ptr.hpp>
Go to the source code of this file.
Data Structures | |
class | HMMData |
class | ProfileColumn |
class | ProfileHandle |
class | ProfileDB |
Namespaces | |
ost | |
ost::seq | |
Typedefs | |
typedef boost::shared_ptr < ProfileHandle > | ProfileHandlePtr |
typedef boost::shared_ptr < HMMData > | HMMDataPtr |
typedef std::vector < ProfileHandlePtr > | ProfileHandleList |
typedef boost::shared_ptr < ProfileDB > | ProfileDBPtr |
typedef std::vector < ProfileColumn > | ProfileColumnList |
Enumerations | |
enum | HMMTransition { HMM_M2M = 0, HMM_M2I = 1, HMM_M2D = 2, HMM_I2M = 3, HMM_I2I = 4, HMM_D2M = 5, HMM_D2D = 6 } |