OpenStructure
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Namespaces | |
ost | |
ost::seq | |
ost::seq::alg | |
Functions | |
Real | HMMScore (const ost::seq::ProfileHandle &profile_0, const ost::seq::ProfileHandle &profile_1, const ost::seq::AlignmentHandle &aln, int seq_0_idx, int seq_1_idx, Real match_score_offset=-0.03, Real correl_score_weight=0.1, Real del_start_penalty_factor=0.6, Real del_extend_penalty_factor=0.6, Real ins_start_penalty_factor=0.6, Real ins_extend_penalty_factor=0.6) |