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build-2.7-doc
stage
include
ost
io
mmcif_str.hh
Go to the documentation of this file.
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//------------------------------------------------------------------------------
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// This file is part of the OpenStructure project <www.openstructure.org>
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//
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// Copyright (C) 2008-2020 by the OpenStructure authors
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//
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// This library is free software; you can redistribute it and/or modify it under
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// the terms of the GNU Lesser General Public License as published by the Free
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// Software Foundation; either version 3.0 of the License, or (at your option)
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// any later version.
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// This library is distributed in the hope that it will be useful, but WITHOUT
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// ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS
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// FOR A PARTICULAR PURPOSE. See the GNU Lesser General Public License for more
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// details.
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//
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// You should have received a copy of the GNU Lesser General Public License
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// along with this library; if not, write to the Free Software Foundation, Inc.,
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// 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA
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//------------------------------------------------------------------------------
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#ifndef OST_IO_MMCIF_STR_HH
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#define OST_IO_MMCIF_STR_HH
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#include <
ost/io/module_config.hh
>
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#include <
ost/io/io_exception.hh
>
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#include <
ost/mol/entity_handle.hh
>
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#include <
ost/io/mmcif_reader.hh
>
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#include <
ost/io/mol/io_profile.hh
>
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namespace
ost {
namespace
io {
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String
DLLEXPORT_OST_IO
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EntityToMMCifString
(
const
ost::mol::EntityHandle
& ent,
const
String
& data_name,
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ost::conop::CompoundLibPtr
compound_lib
,
bool
mmcif_conform);
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String
DLLEXPORT_OST_IO
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EntityToMMCifString
(
const
ost::mol::EntityView
& ent,
const
String
& data_name,
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ost::conop::CompoundLibPtr
compound_lib
,
bool
mmcif_conform);
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std::tuple<mol::EntityHandle, MMCifInfo, ost::seq::SequenceList>
DLLEXPORT_OST_IO
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MMCifStringToEntity
(
const
String
& mmcif,
const
IOProfile& profile,
bool
process);
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}}
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#endif
entity_handle.hh
String
std::string String
Definition:
base.hh:54
ost::mol::EntityHandle
Protein or molecule.
Definition:
entity_handle.hh:54
ost::io::EntityToMMCifString
String DLLEXPORT_OST_IO EntityToMMCifString(const ost::mol::EntityHandle &ent, const String &data_name, ost::conop::CompoundLibPtr compound_lib, bool mmcif_conform)
ost::io::MMCifStringToEntity
std::tuple< mol::EntityHandle, MMCifInfo, ost::seq::SequenceList > DLLEXPORT_OST_IO MMCifStringToEntity(const String &mmcif, const IOProfile &profile, bool process)
ost::gui.dng.init.compound_lib
tuple compound_lib
Definition:
init.py:184
ost::conop::CompoundLibPtr
boost::shared_ptr< CompoundLib > CompoundLibPtr
Definition:
compound_lib.hh:32
io_exception.hh
mmcif_reader.hh
DLLEXPORT_OST_IO
#define DLLEXPORT_OST_IO
Definition:
module_config.hh:27
module_config.hh
ost::mol::EntityView
definition of EntityView
Definition:
entity_view.hh:86
io_profile.hh
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