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mmcif_str.hh
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1 //------------------------------------------------------------------------------
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4 // Copyright (C) 2008-2020 by the OpenStructure authors
5 //
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18 //------------------------------------------------------------------------------
19 #ifndef OST_IO_MMCIF_STR_HH
20 #define OST_IO_MMCIF_STR_HH
21 
22 #include <ost/io/module_config.hh>
23 #include <ost/io/io_exception.hh>
24 #include <ost/mol/entity_handle.hh>
25 #include <ost/io/mmcif_reader.hh>
26 #include <ost/io/mol/io_profile.hh>
27 
28 namespace ost { namespace io {
29 
31 EntityToMMCifString(const ost::mol::EntityHandle& ent, const String& data_name,
32  ost::conop::CompoundLibPtr compound_lib, bool mmcif_conform);
33 
35 EntityToMMCifString(const ost::mol::EntityView& ent, const String& data_name,
36  ost::conop::CompoundLibPtr compound_lib, bool mmcif_conform);
37 
38 std::tuple<mol::EntityHandle, MMCifInfo, ost::seq::SequenceList> DLLEXPORT_OST_IO
39 MMCifStringToEntity(const String& mmcif, const IOProfile& profile, bool process);
40 
41 }}
42 
43 #endif
std::string String
Definition: base.hh:54
Protein or molecule.
String DLLEXPORT_OST_IO EntityToMMCifString(const ost::mol::EntityHandle &ent, const String &data_name, ost::conop::CompoundLibPtr compound_lib, bool mmcif_conform)
std::tuple< mol::EntityHandle, MMCifInfo, ost::seq::SequenceList > DLLEXPORT_OST_IO MMCifStringToEntity(const String &mmcif, const IOProfile &profile, bool process)
tuple compound_lib
Definition: init.py:184
boost::shared_ptr< CompoundLib > CompoundLibPtr
Definition: compound_lib.hh:32
#define DLLEXPORT_OST_IO
definition of EntityView
Definition: entity_view.hh:86