amino_acids.hh File Reference

#include <set>
#include <ost/dllexport.hh>
#include <ost/mol/residue_handle.hh>
#include <ost/mol/torsion_handle.hh>
#include <ost/conop/module_config.hh>

Go to the source code of this file.

Data Structures
class	AminoAcidSetIterator
class	AminoAcidSet
	Amino acid bit set. More...

Namespaces
namespace	ost
namespace	ost::conop

Typedefs
typedef std::vector< AminoAcidSet >	AminoAcidAlphabet

Enumerations
enum	AminoAcid {   ALA, ARG, ASN, ASP,   GLN, GLU, LYS, SER,   CYS, MET, TRP, TYR,   THR, VAL, ILE, LEU,   GLY, PRO, HIS, PHE,   XXX }

Functions
DLLEXPORT_OST_CONOP AminoAcid	ResidueToAminoAcid (const mol::ResidueHandle &r)
DLLEXPORT_OST_CONOP String	AminoAcidToResidueName (AminoAcid aa)
DLLEXPORT_OST_CONOP String	OneLetterCodeToResidueName (char olc)
DLLEXPORT_OST_CONOP AminoAcid	OneLetterCodeToAminoAcid (char olc)
char DLLEXPORT_OST_CONOP	ResidueNameToOneLetterCode (String rn)
DLLEXPORT_OST_CONOP std::ostream &	operator<< (std::ostream &os, const AminoAcidSet &aa_set)