stage/include/ost/seq/alg/distance_map.hh File Reference

#include <numeric>
#include <cmath>
#include <algorithm>
#include <ost/tri_matrix.hh>
#include <ost/integrity_error.hh>
#include <ost/seq/alignment_handle.hh>
#include <ost/seq/alg/module_config.hh>

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Data Structures
struct	Distances
	Container for a pair wise distance for each structure. Each structure is identified by its index in the originally used alignment. More...
class	DistanceMap
Namespaces
namespace	ost
namespace	ost::seq
namespace	ost::seq::alg
Typedefs
typedef boost::shared_ptr < DistanceMap >	DistanceMapPtr
Functions
DistanceMapPtr DLLEXPORT_OST_SEQ_ALG	CreateDistanceMap (const seq::AlignmentHandle &alignment)