#include <ost/base.hh>
#include <ost/stdint.hh>
#include <ost/message.hh>
#include <ost/seq/module_config.hh>
#include <string.h>
#include <vector>
#include <map>
#include <fstream>
#include <boost/shared_ptr.hpp>
Go to the source code of this file.
Data Structures | |
class | ProfileColumn |
Defines profile of 20 frequencies for one residue. More... | |
class | ProfileHandle |
Provides a profile for a sequence. More... | |
class | ProfileDB |
Contains a DB of profiles (identified by a unique name (String)). More... | |
Namespaces | |
namespace | ost |
namespace | ost::seq |
Typedefs | |
typedef boost::shared_ptr < ProfileHandle > | ProfileHandlePtr |
typedef std::vector < ProfileHandlePtr > | ProfileHandleList |
typedef boost::shared_ptr < ProfileDB > | ProfileDBPtr |
typedef std::vector < ProfileColumn > | ProfileColumnList |