stage/include/ost/io/promod_io_handler.hh
Go to the documentation of this file.00001 //------------------------------------------------------------------------------ 00002 // This file is part of the OpenStructure project <www.openstructure.org> 00003 // 00004 // Copyright (C) 2008-2011 by the OpenStructure authors 00005 // 00006 // This library is free software; you can redistribute it and/or modify it under 00007 // the terms of the GNU Lesser General Public License as published by the Free 00008 // Software Foundation; either version 3.0 of the License, or (at your option) 00009 // any later version. 00010 // This library is distributed in the hope that it will be useful, but WITHOUT 00011 // ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS 00012 // FOR A PARTICULAR PURPOSE. See the GNU Lesser General Public License for more 00013 // details. 00014 // 00015 // You should have received a copy of the GNU Lesser General Public License 00016 // along with this library; if not, write to the Free Software Foundation, Inc., 00017 // 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA 00018 //------------------------------------------------------------------------------ 00019 #ifndef OST_IO_PROMOD_IO_HANDLER_HH 00020 #define OST_IO_PROMOD_IO_HANDLER_HH 00021 00022 /* 00023 Author: Marco Biasini 00024 */ 00025 00026 #include <ost/io/seq/sequence_io_handler.hh> 00027 00028 namespace ost { namespace io { 00029 00030 class DLLEXPORT_OST_IO PromodIOHandler : public SequenceIOHandler{ 00031 public: 00032 virtual void Import(seq::SequenceList& ali, 00033 const boost::filesystem::path& loc); 00034 00035 virtual void Export(const seq::ConstSequenceList& ent, 00036 const boost::filesystem::path& loc) const; 00037 00038 virtual void Import(seq::SequenceList& ent, 00039 std::istream& instream); 00040 00041 virtual void Export(const seq::ConstSequenceList& ent, 00042 std::ostream& ostream) const; 00043 00044 static bool ProvidesImport(const boost::filesystem::path& loc, 00045 const String& format="auto"); 00046 static bool ProvidesExport(const boost::filesystem::path& loc, 00047 const String& format="auto"); 00048 00049 static String GetFormatName() { return String("ProMod"); } 00050 static String GetFormatDescription() { return String("Format used by the SwissModel modeling server"); } 00051 }; 00052 00053 typedef SequenceIOHandlerFactory<PromodIOHandler> PromodIOHandlerFactory; 00054 00055 }} 00056 00057 #endif
