#include <numeric>
#include <cmath>
#include <algorithm>
#include <ost/tri_matrix.hh>
#include <ost/integrity_error.hh>
#include <ost/seq/alignment_handle.hh>
#include <ost/seq/alg/module_config.hh>
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Data Structures | |
struct | Distances |
Container for a pair wise distance for each structure. Each structure is identified by its index in the originally used alignment. More... | |
class | DistanceMap |
Namespaces | |
namespace | ost |
namespace | ost::seq |
namespace | ost::seq::alg |
Typedefs | |
typedef boost::shared_ptr < DistanceMap > | DistanceMapPtr |
Functions | |
DistanceMapPtr DLLEXPORT_OST_SEQ_ALG | CreateDistanceMap (const seq::AlignmentHandle &alignment) |