stage/include/ost/io/seq/hhm_io_handler.hh
Go to the documentation of this file.00001 //------------------------------------------------------------------------------ 00002 // This file is part of the OpenStructure project <www.openstructure.org> 00003 // 00004 // Copyright (C) 2008-2015 by the OpenStructure authors 00005 // 00006 // This library is free software; you can redistribute it and/or modify it under 00007 // the terms of the GNU Lesser General Public License as published by the Free 00008 // Software Foundation; either version 3.0 of the License, or (at your option) 00009 // any later version. 00010 // This library is distributed in the hope that it will be useful, but WITHOUT 00011 // ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS 00012 // FOR A PARTICULAR PURPOSE. See the GNU Lesser General Public License for more 00013 // details. 00014 // 00015 // You should have received a copy of the GNU Lesser General Public License 00016 // along with this library; if not, write to the Free Software Foundation, Inc., 00017 // 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA 00018 //------------------------------------------------------------------------------ 00019 00020 /* 00021 Author: Gerardo Tauriello 00022 */ 00023 00024 #ifndef OST_HHM_IO_HANDLER_HH 00025 #define OST_HHM_IO_HANDLER_HH 00026 00027 #include <ost/io/module_config.hh> 00028 #include "profile_io_handler.hh" 00029 00030 namespace ost { namespace io { 00031 00032 class DLLEXPORT_OST_IO HhmIOHandler : public ProfileIOHandler { 00033 public: 00034 virtual void Import(seq::ProfileHandle& prof, 00035 const boost::filesystem::path& loc); 00036 virtual void Export(const seq::ProfileHandle& prof, 00037 const boost::filesystem::path& loc) const; 00038 00039 static bool ProvidesImport(const boost::filesystem::path& loc, 00040 const String& format="auto"); 00041 static bool ProvidesExport(const boost::filesystem::path& loc, 00042 const String& format="auto"); 00043 00044 static String GetFormatName() { return String("HHM"); } 00045 static String GetFormatDescription() { return String("HHM output of HHblits"); } 00046 }; 00047 00048 typedef ProfileIOHandlerFactory<HhmIOHandler> HhmIOHandlerFactory; 00049 00050 }} 00051 00052 #endif
