distance_rmsd_test.hh

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//------------------------------------------------------------------------------
// This file is part of the OpenStructure project <www.openstructure.org>
//
// Copyright (C) 2008-2011 by the OpenStructure authors
//
// This library is free software; you can redistribute it and/or modify it under
// the terms of the GNU Lesser General Public License as published by the Free
// Software Foundation; either version 3.0 of the License, or (at your option)
// any later version.
// This library is distributed in the hope that it will be useful, but WITHOUT
// ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS
// FOR A PARTICULAR PURPOSE.  See the GNU Lesser General Public License for more
// details.
//
// You should have received a copy of the GNU Lesser General Public License
// along with this library; if not, write to the Free Software Foundation, Inc.,
// 51 Franklin Street, Fifth Floor, Boston, MA  02110-1301  USA
//------------------------------------------------------------------------------
#ifndef OST_MOL_ALG_DISTANCE_RMSD_TEST_HH
#define OST_MOL_ALG_DISTANCE_RMSD_TEST_HH

#include <ost/mol/entity_view.hh>
#include <ost/mol/alg/module_config.hh>
#include <ost/mol/alg/local_dist_diff_test.hh>

namespace ost { namespace mol { namespace alg {
  
std::pair<Real,long int> DLLEXPORT_OST_MOL_ALG 
DistanceRMSDTest(const EntityView& mdl,
                 const GlobalRDMap& glob_dist_list,
                 Real cap_distance, int sequence_separation = 0,
                 const String& local_drmsdt_property_string="");


Real DLLEXPORT_OST_MOL_ALG DRMSD(const EntityView& v, 
                                 const GlobalRDMap& global_dist_list, 
                                 Real cap_distance, int sequence_separation=0);

}}}

#endif