mmcif_str.hh

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//------------------------------------------------------------------------------
// This file is part of the OpenStructure project <www.openstructure.org>
//
// Copyright (C) 2008-2020 by the OpenStructure authors
//
// This library is free software; you can redistribute it and/or modify it under
// the terms of the GNU Lesser General Public License as published by the Free
// Software Foundation; either version 3.0 of the License, or (at your option)
// any later version.
// This library is distributed in the hope that it will be useful, but WITHOUT
// ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS
// FOR A PARTICULAR PURPOSE.  See the GNU Lesser General Public License for more
// details.
//
// You should have received a copy of the GNU Lesser General Public License
// along with this library; if not, write to the Free Software Foundation, Inc.,
// 51 Franklin Street, Fifth Floor, Boston, MA  02110-1301  USA
//------------------------------------------------------------------------------
#ifndef OST_IO_MMCIF_STR_HH
#define OST_IO_MMCIF_STR_HH
 
#include <ost/io/module_config.hh>
#include <ost/io/io_exception.hh>
#include <ost/mol/entity_handle.hh>
#include <ost/io/mmcif_reader.hh>
#include <ost/io/mol/io_profile.hh>
#include <ost/io/mmcif_writer.hh>
#include <ost/io/mol/omf.hh>
 
namespace ost { namespace io {
 
String DLLEXPORT_OST_IO
EntityToMMCifString(const ost::mol::EntityHandle& ent, const String& data_name,
                    ost::conop::CompoundLibPtr compound_lib, bool mmcif_conform,
                    const std::vector<MMCifWriterEntity>& entity_info = std::vector<MMCifWriterEntity>());
 
String DLLEXPORT_OST_IO
EntityToMMCifString(const ost::mol::EntityView& ent, const String& data_name,
                    ost::conop::CompoundLibPtr compound_lib, bool mmcif_conform,
                    const std::vector<MMCifWriterEntity>& entity_info = std::vector<MMCifWriterEntity>());
 
String DLLEXPORT_OST_IO
OMFToMMCifString(const ost::io::OMF& omf, const String& data_name,
                 ost::conop::CompoundLibPtr compound_lib, bool mmcif_conform,
                 const std::vector<MMCifWriterEntity>& entity_info = std::vector<MMCifWriterEntity>());
 
std::tuple<mol::EntityHandle, MMCifInfo, ost::seq::SequenceList> DLLEXPORT_OST_IO
MMCifStringToEntity(const String& mmcif, const IOProfile& profile, bool process);
 
}}
 
#endif