sequence_similarity.hh File Reference

#include <ost/seq/alg/module_config.hh>
#include <ost/seq/alignment_handle.hh>
#include <ost/seq/alg/subst_weight_matrix.hh>

Go to the source code of this file.

Namespaces
namespace	ost
namespace	ost::seq
namespace	ost::seq::alg

Functions
Real DLLEXPORT_OST_SEQ_ALG	SequenceSimilarity (const AlignmentHandle &aln, SubstWeightMatrixPtr subst, bool normalize=false, int seq_a=0, int seq_b=1)