sequence_similarity.hh File Reference

#include <ost/seq/alg/module_config.hh>
#include <ost/seq/alignment_handle.hh>
#include <ost/seq/alg/subst_weight_matrix.hh>

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Namespaces
	ost
	ost::seq
	ost::seq::alg

Functions
Real DLLEXPORT_OST_SEQ_ALG	SequenceSimilarity (const AlignmentHandle &aln, SubstWeightMatrixPtr subst, bool normalize=false, int seq_a=0, int seq_b=1)