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load.hh File Reference
#include <ost/io/module_config.hh>
#include <ost/seq/sequence_list.hh>
#include <ost/seq/alignment_handle.hh>
#include <ost/seq/profile_handle.hh>

Go to the source code of this file.

Namespaces

 ost
 
 ost::io
 

Functions

seq::AlignmentHandle
DLLEXPORT_OST_IO 
LoadAlignment (const String &file_name, const String &format="auto")
 
seq::AlignmentHandle
DLLEXPORT_OST_IO 
AlignmentFromStream (std::istream &stream, const String &format)
 
seq::AlignmentHandle
DLLEXPORT_OST_IO 
AlignmentFromString (const String &data, const String &format)
 
seq::SequenceList DLLEXPORT_OST_IO LoadSequenceList (const String &file_name, const String &format="auto")
 
seq::SequenceList DLLEXPORT_OST_IO SequenceListFromStream (std::istream &stream, const String &format)
 
seq::SequenceList DLLEXPORT_OST_IO SequenceListFromString (const String &data, const String &format)
 
seq::SequenceHandle
DLLEXPORT_OST_IO 
LoadSequence (const String &file_name, const String &format="auto")
 
seq::SequenceHandle
DLLEXPORT_OST_IO 
SequenceFromStream (std::istream &stream, const String &format)
 
seq::SequenceHandle
DLLEXPORT_OST_IO 
SequenceFromString (const String &data, const String &format)
 
seq::ProfileHandlePtr
DLLEXPORT_OST_IO 
LoadSequenceProfile (const String &file_name, const String &format="auto")
 
seq::ProfileHandlePtr
DLLEXPORT_OST_IO 
SequenceProfileFromString (const String &data, const String &format)