OpenStructure
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#include <ost/seq/profile_handle.hh>
Go to the source code of this file.
Data Structures | |
class | ContextProfile |
class | ContextProfileDB |
Namespaces | |
ost | |
ost::seq | |
ost::seq::alg | |
Typedefs | |
typedef boost::shared_ptr< ContextProfileDB > | ContextProfileDBPtr |
Functions | |
void | AddTransitionPseudoCounts (ost::seq::ProfileHandle &profile, Real gapb=1.0, Real gabd=0.15, Real gape=1.0) |
void | AddAAPseudoCounts (ost::seq::ProfileHandle &profile, Real a=1.0, Real b=1.5, Real c=1.0) |
void | AddAAPseudoCounts (ost::seq::ProfileHandle &profile, const ContextProfileDB &db, Real a=0.9, Real b=4.0, Real c=1.0) |
void | AddNullPseudoCounts (ost::seq::ProfileHandle &profile) |