OpenStructure
Main Page
Related Pages
Modules
Namespaces
Namespace List
Namespace Members
All
a
b
c
d
e
f
g
h
i
k
l
m
n
o
p
q
r
s
t
u
v
w
x
y
z
Functions
a
b
c
d
e
f
g
h
i
k
l
m
n
o
p
q
r
s
t
u
v
w
Variables
a
b
c
d
e
f
g
h
l
m
n
o
p
r
s
u
v
w
x
y
z
Typedefs
a
b
c
d
e
f
g
h
i
l
m
n
o
p
q
r
s
t
u
v
w
Enumerations
a
b
c
d
e
f
h
i
l
m
n
o
p
r
s
t
Enumerator
a
b
c
d
e
f
g
h
i
l
m
n
o
p
r
s
t
u
v
w
x
Data Structures
Data Structures
Data Structure Index
Class Hierarchy
Data Fields
All
:
_
a
b
c
d
e
f
g
h
i
j
k
l
m
n
o
p
q
r
s
t
u
v
w
x
y
z
~
Functions
_
a
b
c
d
e
f
g
h
i
j
k
l
m
n
o
p
q
r
s
t
u
v
w
x
z
~
Variables
a
b
c
d
e
f
g
h
i
j
k
l
m
n
o
p
q
r
s
t
u
v
w
x
y
z
Typedefs
a
b
c
d
e
f
i
m
n
p
r
s
v
w
Enumerations
Enumerator
a
b
c
d
e
f
g
i
j
k
l
m
n
o
p
q
r
s
t
u
v
w
x
y
z
Properties
Related Functions
:
a
c
d
e
g
i
l
m
o
r
s
t
x
Files
File List
Globals
All
_
b
c
d
f
g
i
l
m
o
p
q
r
s
u
v
w
Functions
c
d
f
g
m
q
v
Typedefs
c
i
r
s
u
w
Macros
_
b
c
d
i
l
o
p
s
u
w
Examples
•
All
Data Structures
Namespaces
Files
Functions
Variables
Typedefs
Enumerations
Enumerator
Properties
Friends
Macros
Modules
Pages
build-dev-doc
stage
include
ost
seq
sequence_op.hh
Go to the documentation of this file.
1
//------------------------------------------------------------------------------
2
// This file is part of the OpenStructure project <www.openstructure.org>
3
//
4
// Copyright (C) 2008-2020 by the OpenStructure authors
5
//
6
// This library is free software; you can redistribute it and/or modify it under
7
// the terms of the GNU Lesser General Public License as published by the Free
8
// Software Foundation; either version 3.0 of the License, or (at your option)
9
// any later version.
10
// This library is distributed in the hope that it will be useful, but WITHOUT
11
// ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS
12
// FOR A PARTICULAR PURPOSE. See the GNU Lesser General Public License for more
13
// details.
14
//
15
// You should have received a copy of the GNU Lesser General Public License
16
// along with this library; if not, write to the Free Software Foundation, Inc.,
17
// 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA
18
//------------------------------------------------------------------------------
19
#ifndef OST_SEQUENCE_OP_HH
20
#define OST_SEQUENCE_OP_HH
21
22
23
#include <
ost/mol/chain_view.hh
>
24
#include <
ost/mol/chain_handle.hh
>
25
#include <
ost/seq/sequence_handle.hh
>
26
27
/*
28
Author: Marco Biasini
29
*/
30
31
namespace
ost
{
namespace
seq {
32
33
35
SequenceHandle
DLLEXPORT_OST_SEQ
36
SequenceFromChain
(
const
String
& name,
const
mol::ChainHandle
& chain);
38
SequenceHandle
DLLEXPORT_OST_SEQ
39
SequenceFromChain
(
const
String
& name,
const
mol::ChainView
& chain);
40
}}
41
42
#endif
chain_handle.hh
chain_view.hh
ost::mol::ChainHandle
linear chain of residues
Definition:
chain_handle.hh:52
ost::mol::ChainView
definition of ChainView
Definition:
chain_view.hh:37
ost::seq::SequenceHandle
mutable sequence handle.
Definition:
sequence_handle.hh:173
String
std::string String
Definition:
base.hh:54
ost::seq::SequenceFromChain
SequenceHandle DLLEXPORT_OST_SEQ SequenceFromChain(const String &name, const mol::ChainHandle &chain)
get sequence from chain
ost
Definition:
base.dox:1
DLLEXPORT_OST_SEQ
#define DLLEXPORT_OST_SEQ
Definition:
module_config.hh:27
sequence_handle.hh
Generated by
1.9.1