You are reading the documentation for version 3.0 of ProMod3.
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1.3
2.0
2.1
3.1
3.2
Other Scoring Functions
Scoring Functions from SCWRL3
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promod3.scoring. SCWRL3PairwiseScore (d, Rij)
Pairwise score from the SCWRL3 sidechain construction algorithm
[canutescu2003b].
Parameters: |
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Returns: | The score
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Return type: | float
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promod3.scoring. SCWRL3DisulfidScore (ca_pos_one, cb_pos_one, sg_pos_one ca_pos_two, cb_pos_two, sg_pos_two)
Implements the empirically derived disulfid score from the SCWRL3 sidechain
construction algorithm [canutescu2003b].
Parameters: |
- ca_pos_one (
ost.geoom.Vec3 ) – CA carbon position of first amino acid
- cb_pos_one (
ost.geoom.Vec3 ) – CB carbon position of first amino acid
- sg_pos_one (
ost.geoom.Vec3 ) – SG sulfur position of first amino acid
- ca_pos_two (
ost.geoom.Vec3 ) – CA carbon position of second amino acid
- cb_pos_two (
ost.geoom.Vec3 ) – CB carbon position of second amino acid
- sg_pos_two (
ost.geoom.Vec3 ) – SG sulfur position of second amino acid
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Returns: | The score
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Return type: | float
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