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Public Member Functions
ProfileIOHandler Class Referenceabstract

#include <profile_io_handler.hh>

Inherited by HhmIOHandler, HhmIOHandler, PssmIOHandler, and PssmIOHandler.

Public Member Functions

virtual ~ProfileIOHandler ()
 
virtual void Import (seq::ProfileHandle &prof, const boost::filesystem::path &loc)=0
 
virtual void ImportFromString (seq::ProfileHandle &prof, const String &data)=0
 
virtual void Export (const seq::ProfileHandle &prof, const boost::filesystem::path &loc) const =0
 
virtual ~ProfileIOHandler ()
 
virtual void Import (seq::ProfileHandle &prof, const boost::filesystem::path &loc)=0
 
virtual void ImportFromString (seq::ProfileHandle &prof, const String &data)=0
 
virtual void Export (const seq::ProfileHandle &prof, const boost::filesystem::path &loc) const =0
 

Detailed Description

pure abstract base class for profile io handlers

Definition at line 37 of file profile_io_handler.hh.

Constructor & Destructor Documentation

virtual ~ProfileIOHandler ( )
inlinevirtual

Definition at line 39 of file profile_io_handler.hh.

virtual ~ProfileIOHandler ( )
inlinevirtual

Definition at line 39 of file profile_io_handler.hh.

Member Function Documentation

virtual void Export ( const seq::ProfileHandle &  prof,
const boost::filesystem::path &  loc 
) const
pure virtual

Implemented in HhmIOHandler, PssmIOHandler, HhmIOHandler, and PssmIOHandler.

virtual void Export ( const seq::ProfileHandle &  prof,
const boost::filesystem::path &  loc 
) const
pure virtual

Implemented in HhmIOHandler, PssmIOHandler, HhmIOHandler, and PssmIOHandler.

virtual void Import ( seq::ProfileHandle &  prof,
const boost::filesystem::path &  loc 
)
pure virtual

Implemented in HhmIOHandler, PssmIOHandler, HhmIOHandler, and PssmIOHandler.

virtual void Import ( seq::ProfileHandle &  prof,
const boost::filesystem::path &  loc 
)
pure virtual

Implemented in HhmIOHandler, PssmIOHandler, HhmIOHandler, and PssmIOHandler.

virtual void ImportFromString ( seq::ProfileHandle &  prof,
const String &  data 
)
pure virtual

Implemented in HhmIOHandler, PssmIOHandler, HhmIOHandler, and PssmIOHandler.

virtual void ImportFromString ( seq::ProfileHandle &  prof,
const String &  data 
)
pure virtual

Implemented in HhmIOHandler, PssmIOHandler, HhmIOHandler, and PssmIOHandler.

The documentation for this class was generated from the following files:
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