You are reading the documentation for version 2.4 of OpenStructure. You may also want to read the documentation for: 1.1 1.2 1.3 1.4 1.5 1.6 1.7 1.7.1 1.8 1.9 1.10 1.11 2.0 2.1 2.2 2.3 2.3.1 devel

Supported Sequence Profile File Formats¶

HHblits output¶

Recognized File Extensions: .hhm, .hhm.gz
Format Name: hhm

PSI-BLAST output¶

ASCII Table (PSSM) output of PSI-BLAST as generated with blastpgp and flag -Q.

Recognized File Extensions: .pssm, .pssm.gz
Format Name: pssm

Supported Sequence Profile File Formats
- HHblits output
- PSI-BLAST output

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Supported Image File Formats