Supported Sequence File Formats¶

FASTA¶

Recognized File Extensions: .fasta, .fna, .fas, .fa, .fsa
Format Name: fasta
Mode: Read/Write

ClustalW¶

Recognized File Extensions: .aln
Format Name: clustal
Mode: Read-only

PIR¶

This is the format used by the Protein Information Resource (PIR).

Recognized File Extensions: .pir
Format Name: pir
Mode: Read/Write

Promod 2¶

Recognized File Extensions: .ali
Format Name: promod
Mode: Read-only

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OpenStructure (2.9.0)
- ost - OpenStructure Base Module
  - io - Input and Output of Sequences, Structures and Maps
    - Supported Sequence File Formats
      - FASTA
      - ClustalW
      - PIR
      - Promod 2

Documentation is available for the following OpenStructure versions:

dev / (Currently viewing 2.9.0) / 2.8 / 2.7 / 2.6 / 2.5 / 2.4 / 2.3.1 / 2.3 / 2.2 / 2.1 / 2.0 / 1.9 / 1.8 / 1.7.1 / 1.7 / 1.6 / 1.5 / 1.4 / 1.3 / 1.2 / 1.11 / 1.10 / 1.1