Distances Struct Reference

#include <distance_map.hh>

Public Types
typedef std::vector< std::pair < Real, int > >	FloatArray

Public Member Functions
uint	GetDataSize () const
void	Add (Real dist, int index)
Real	GetAverage () const
std::pair< Real, int >	GetMin () const
std::pair< Real, int >	GetMax () const
std::pair< Real, int >	GetDataElement (uint index) const
Real	GetStdDev () const
Real	GetWeightedStdDev (Real sigma) const
Real	GetNormStdDev () const
bool	operator== (const Distances &rhs) const
bool	operator!= (const Distances &rhs) const

Detailed Description

Container for a pair wise distance for each structure. Each structure is identified by its index in the originally used alignment.

Definition at line 63 of file distance_map.hh.

Member Typedef Documentation

typedef std::vector<std::pair<Real,int> > FloatArray

Definition at line 65 of file distance_map.hh.

Member Function Documentation

void Add ( Real  dist, int  index  )

inline

Definition at line 69 of file distance_map.hh.

Real GetAverage ( ) const

inline

Definition at line 73 of file distance_map.hh.

std::pair<Real,int> GetDataElement ( uint  index ) const

inline

Definition at line 92 of file distance_map.hh.

uint GetDataSize ( ) const

inline

Definition at line 67 of file distance_map.hh.

std::pair<Real,int> GetMax ( ) const

inline

Definition at line 86 of file distance_map.hh.

std::pair<Real,int> GetMin ( ) const

inline

Definition at line 80 of file distance_map.hh.

Real GetNormStdDev ( ) const

inline

Definition at line 120 of file distance_map.hh.

Real GetStdDev ( ) const

inline

Definition at line 107 of file distance_map.hh.

Real GetWeightedStdDev ( Real  sigma ) const

inline

Definition at line 113 of file distance_map.hh.

bool operator!= ( const Distances &  rhs ) const

inline

Definition at line 127 of file distance_map.hh.

bool operator== ( const Distances &  rhs ) const

inline

Definition at line 126 of file distance_map.hh.

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The documentation for this struct was generated from the following file:

• stage/include/ost/seq/alg/distance_map.hh