24 #ifndef OST_PSSM_IO_HANDLER_HH
25 #define OST_PSSM_IO_HANDLER_HH
30 namespace ost {
namespace io {
34 virtual void Import(seq::ProfileHandle& prof,
35 const boost::filesystem::path& loc);
36 virtual void Export(
const seq::ProfileHandle& prof,
37 const boost::filesystem::path& loc)
const;
39 static bool ProvidesImport(
const boost::filesystem::path& loc,
40 const String& format=
"auto");
41 static bool ProvidesExport(
const boost::filesystem::path& loc,
42 const String& format=
"auto");
46 return String(
"ASCII Table (PSSM) output of PSI-BLAST (flag -Q)");
static String GetFormatDescription()
static String GetFormatName()
ProfileIOHandlerFactory< PssmIOHandler > PssmIOHandlerFactory