PDBReader Class Reference

#include <pdb_reader.hh>

Data Structures
struct	CompndEntry
struct	HetEntry
struct	HSEntry

Public Member Functions
	PDBReader (const String &filename, const IOProfile &profile)
	PDBReader (const boost::filesystem::path &loc, const IOProfile &profile)
	PDBReader (std::istream &instream, const IOProfile &profile)
bool	HasNext ()
void	Import (mol::EntityHandle &ent, const String &restrict_chains="")
void	SetReadSeqRes (bool flag)
bool	GetReadSeqRes () const
seq::SequenceList	GetSeqRes () const
	PDBReader (const String &filename, const IOProfile &profile)
	PDBReader (const boost::filesystem::path &loc, const IOProfile &profile)
	PDBReader (std::istream &instream, const IOProfile &profile)
bool	HasNext ()
void	Import (mol::EntityHandle &ent, const String &restrict_chains="")
void	SetReadSeqRes (bool flag)
bool	GetReadSeqRes () const
seq::SequenceList	GetSeqRes () const

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Detailed Description

Definition at line 39 of file pdb_reader.hh.

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Constructor & Destructor Documentation

PDBReader	(	const String &	filename,
		const IOProfile &	profile
	)

PDBReader	(	const boost::filesystem::path &	loc,
		const IOProfile &	profile
	)

PDBReader	(	std::istream &	instream,
		const IOProfile &	profile
	)

PDBReader	(	const String &	filename,
		const IOProfile &	profile
	)

PDBReader	(	const boost::filesystem::path &	loc,
		const IOProfile &	profile
	)

PDBReader	(	std::istream &	instream,
		const IOProfile &	profile
	)

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Member Function Documentation

bool GetReadSeqRes ( ) const

inline

Definition at line 68 of file pdb_reader.hh.

bool GetReadSeqRes ( ) const

inline

Definition at line 68 of file pdb_reader.hh.

seq::SequenceList GetSeqRes ( ) const

inline

Definition at line 70 of file pdb_reader.hh.

seq::SequenceList GetSeqRes ( ) const

inline

Definition at line 70 of file pdb_reader.hh.

bool HasNext

(

)

bool HasNext

(

)

void Import	(	mol::EntityHandle &	ent,
		const String &	restrict_chains = ""
	)

void Import	(	mol::EntityHandle &	ent,
		const String &	restrict_chains = ""
	)

void SetReadSeqRes ( bool  flag )

inline

Definition at line 67 of file pdb_reader.hh.

void SetReadSeqRes ( bool  flag )

inline

Definition at line 67 of file pdb_reader.hh.

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The documentation for this class was generated from the following files:

• stage/include/ost/io/mol/pdb_reader.hh
• stage/include/ost/io/pdb_reader.hh