BlastHit Class Reference

Public Member Functions
def	__init__

Data Fields
	identifier
	aligned_patches

---

Detailed Description

A positive match found by BLAST.

Each blast hit consists of one or more HSPs, encoded by the
:class:`AlignedPatch` class.

.. attribute:: identifier

  The identifier of the matching sequence

.. attribute:: aligned_patches

  list of :class:`AlignedPatch` instances holding the actual HSPs.

Definition at line 44 of file blast.py.

---

Constructor & Destructor Documentation

def __init__	(		self,
			identifier,
			aligned_patches
	)

Definition at line 59 of file blast.py.

---

Field Documentation

aligned_patches

Definition at line 61 of file blast.py.

identifier

Definition at line 60 of file blast.py.

---

The documentation for this class was generated from the following file:

• stage/lib64/python2.5/site-packages/ost/bindings/blast.py