ProfileIOHandler Class Reference

pure abstract base class for profile io handlers More...

#include <profile_io_handler.hh>

Inherited by HhmIOHandler, HhmIOHandler, PssmIOHandler, and PssmIOHandler.

Public Member Functions
virtual	~ProfileIOHandler ()
virtual void	Import (seq::ProfileHandle &prof, const boost::filesystem::path &loc)=0
virtual void	Export (const seq::ProfileHandle &prof, const boost::filesystem::path &loc) const =0
virtual	~ProfileIOHandler ()
virtual void	Import (seq::ProfileHandle &prof, const boost::filesystem::path &loc)=0
virtual void	Export (const seq::ProfileHandle &prof, const boost::filesystem::path &loc) const =0

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Detailed Description

pure abstract base class for profile io handlers

Definition at line 37 of file profile_io_handler.hh.

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Constructor & Destructor Documentation

virtual ~ProfileIOHandler

(

)

[inline, virtual]

Definition at line 39 of file profile_io_handler.hh.

virtual ~ProfileIOHandler

(

)

[inline, virtual]

Definition at line 39 of file profile_io_handler.hh.

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Member Function Documentation

virtual void Export	(	const seq::ProfileHandle &	prof,
		const boost::filesystem::path &	loc
	)			const [pure virtual]

Implemented in HhmIOHandler, PssmIOHandler, HhmIOHandler, and PssmIOHandler.

virtual void Export	(	const seq::ProfileHandle &	prof,
		const boost::filesystem::path &	loc
	)			const [pure virtual]

Implemented in HhmIOHandler, PssmIOHandler, HhmIOHandler, and PssmIOHandler.

virtual void Import	(	seq::ProfileHandle &	prof,
		const boost::filesystem::path &	loc
	)			[pure virtual]

Implemented in HhmIOHandler, PssmIOHandler, HhmIOHandler, and PssmIOHandler.

virtual void Import	(	seq::ProfileHandle &	prof,
		const boost::filesystem::path &	loc
	)			[pure virtual]

Implemented in HhmIOHandler, PssmIOHandler, HhmIOHandler, and PssmIOHandler.

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The documentation for this class was generated from the following files:

• stage/include/ost/io/profile_io_handler.hh
• stage/include/ost/io/seq/profile_io_handler.hh