HHblitsHeader Class Reference

Public Member Functions
def	__init__
Data Fields
	query
	match_columns
	n_eff
	searched_hmms
	date
	command

Detailed Description

Stats from the beginning of search output.

.. attribute:: query

  The name of the query sequence

  :type: :class:`str`

.. attribute:: match_columns

  Total of aligned Match columns

  :type: :class:`int`

.. attribute:: n_eff

  Value of the ``-neff`` option

  :type: :class:`float`

.. attribute:: searched_hmms

  Number of profiles searched

  :type: :class:`int`

.. attribute:: date

  Execution date

  :type: :class:`datetime.datetime`

.. attribute:: command

  Command used to run

  :type: :class:`str`

Definition at line 70 of file hhblits.py.