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AddFromFiles() :
ost::mol::mm::antechamber
AddFromPath() :
ost::mol::mm::antechamber
AddIon() :
ost::mol::mm::antechamber
AddLinesAndFaces() :
ost::gfx::map_iso
AddLinesAndFaces< 0 >() :
ost::gfx::map_iso
AddLinesAndFaces< 1 >() :
ost::gfx::map_iso
AddLinesAndFaces< 10 >() :
ost::gfx::map_iso
AddLinesAndFaces< 100 >() :
ost::gfx::map_iso
AddLinesAndFaces< 101 >() :
ost::gfx::map_iso
AddLinesAndFaces< 102 >() :
ost::gfx::map_iso
AddLinesAndFaces< 103 >() :
ost::gfx::map_iso
AddLinesAndFaces< 104 >() :
ost::gfx::map_iso
AddLinesAndFaces< 105 >() :
ost::gfx::map_iso
AddLinesAndFaces< 106 >() :
ost::gfx::map_iso
AddLinesAndFaces< 107 >() :
ost::gfx::map_iso
AddLinesAndFaces< 108 >() :
ost::gfx::map_iso
AddLinesAndFaces< 109 >() :
ost::gfx::map_iso
AddLinesAndFaces< 11 >() :
ost::gfx::map_iso
AddLinesAndFaces< 110 >() :
ost::gfx::map_iso
AddLinesAndFaces< 111 >() :
ost::gfx::map_iso
AddLinesAndFaces< 112 >() :
ost::gfx::map_iso
AddLinesAndFaces< 113 >() :
ost::gfx::map_iso
AddLinesAndFaces< 114 >() :
ost::gfx::map_iso
AddLinesAndFaces< 115 >() :
ost::gfx::map_iso
AddLinesAndFaces< 116 >() :
ost::gfx::map_iso
AddLinesAndFaces< 117 >() :
ost::gfx::map_iso
AddLinesAndFaces< 118 >() :
ost::gfx::map_iso
AddLinesAndFaces< 119 >() :
ost::gfx::map_iso
AddLinesAndFaces< 12 >() :
ost::gfx::map_iso
AddLinesAndFaces< 120 >() :
ost::gfx::map_iso
AddLinesAndFaces< 121 >() :
ost::gfx::map_iso
AddLinesAndFaces< 122 >() :
ost::gfx::map_iso
AddLinesAndFaces< 123 >() :
ost::gfx::map_iso
AddLinesAndFaces< 124 >() :
ost::gfx::map_iso
AddLinesAndFaces< 125 >() :
ost::gfx::map_iso
AddLinesAndFaces< 126 >() :
ost::gfx::map_iso
AddLinesAndFaces< 127 >() :
ost::gfx::map_iso
AddLinesAndFaces< 128 >() :
ost::gfx::map_iso
AddLinesAndFaces< 129 >() :
ost::gfx::map_iso
AddLinesAndFaces< 13 >() :
ost::gfx::map_iso
AddLinesAndFaces< 130 >() :
ost::gfx::map_iso
AddLinesAndFaces< 131 >() :
ost::gfx::map_iso
AddLinesAndFaces< 132 >() :
ost::gfx::map_iso
AddLinesAndFaces< 133 >() :
ost::gfx::map_iso
AddLinesAndFaces< 134 >() :
ost::gfx::map_iso
AddLinesAndFaces< 135 >() :
ost::gfx::map_iso
AddLinesAndFaces< 136 >() :
ost::gfx::map_iso
AddLinesAndFaces< 137 >() :
ost::gfx::map_iso
AddLinesAndFaces< 138 >() :
ost::gfx::map_iso
AddLinesAndFaces< 139 >() :
ost::gfx::map_iso
AddLinesAndFaces< 14 >() :
ost::gfx::map_iso
AddLinesAndFaces< 140 >() :
ost::gfx::map_iso
AddLinesAndFaces< 141 >() :
ost::gfx::map_iso
AddLinesAndFaces< 142 >() :
ost::gfx::map_iso
AddLinesAndFaces< 143 >() :
ost::gfx::map_iso
AddLinesAndFaces< 144 >() :
ost::gfx::map_iso
AddLinesAndFaces< 145 >() :
ost::gfx::map_iso
AddLinesAndFaces< 146 >() :
ost::gfx::map_iso
AddLinesAndFaces< 147 >() :
ost::gfx::map_iso
AddLinesAndFaces< 148 >() :
ost::gfx::map_iso
AddLinesAndFaces< 149 >() :
ost::gfx::map_iso
AddLinesAndFaces< 15 >() :
ost::gfx::map_iso
AddLinesAndFaces< 150 >() :
ost::gfx::map_iso
AddLinesAndFaces< 151 >() :
ost::gfx::map_iso
AddLinesAndFaces< 152 >() :
ost::gfx::map_iso
AddLinesAndFaces< 153 >() :
ost::gfx::map_iso
AddLinesAndFaces< 154 >() :
ost::gfx::map_iso
AddLinesAndFaces< 155 >() :
ost::gfx::map_iso
AddLinesAndFaces< 156 >() :
ost::gfx::map_iso
AddLinesAndFaces< 157 >() :
ost::gfx::map_iso
AddLinesAndFaces< 158 >() :
ost::gfx::map_iso
AddLinesAndFaces< 159 >() :
ost::gfx::map_iso
AddLinesAndFaces< 16 >() :
ost::gfx::map_iso
AddLinesAndFaces< 160 >() :
ost::gfx::map_iso
AddLinesAndFaces< 161 >() :
ost::gfx::map_iso
AddLinesAndFaces< 162 >() :
ost::gfx::map_iso
AddLinesAndFaces< 163 >() :
ost::gfx::map_iso
AddLinesAndFaces< 164 >() :
ost::gfx::map_iso
AddLinesAndFaces< 165 >() :
ost::gfx::map_iso
AddLinesAndFaces< 166 >() :
ost::gfx::map_iso
AddLinesAndFaces< 167 >() :
ost::gfx::map_iso
AddLinesAndFaces< 168 >() :
ost::gfx::map_iso
AddLinesAndFaces< 169 >() :
ost::gfx::map_iso
AddLinesAndFaces< 17 >() :
ost::gfx::map_iso
AddLinesAndFaces< 170 >() :
ost::gfx::map_iso
AddLinesAndFaces< 171 >() :
ost::gfx::map_iso
AddLinesAndFaces< 172 >() :
ost::gfx::map_iso
AddLinesAndFaces< 173 >() :
ost::gfx::map_iso
AddLinesAndFaces< 174 >() :
ost::gfx::map_iso
AddLinesAndFaces< 175 >() :
ost::gfx::map_iso
AddLinesAndFaces< 176 >() :
ost::gfx::map_iso
AddLinesAndFaces< 177 >() :
ost::gfx::map_iso
AddLinesAndFaces< 178 >() :
ost::gfx::map_iso
AddLinesAndFaces< 179 >() :
ost::gfx::map_iso
AddLinesAndFaces< 18 >() :
ost::gfx::map_iso
AddLinesAndFaces< 180 >() :
ost::gfx::map_iso
AddLinesAndFaces< 181 >() :
ost::gfx::map_iso
AddLinesAndFaces< 182 >() :
ost::gfx::map_iso
AddLinesAndFaces< 183 >() :
ost::gfx::map_iso
AddLinesAndFaces< 184 >() :
ost::gfx::map_iso
AddLinesAndFaces< 185 >() :
ost::gfx::map_iso
AddLinesAndFaces< 186 >() :
ost::gfx::map_iso
AddLinesAndFaces< 187 >() :
ost::gfx::map_iso
AddLinesAndFaces< 188 >() :
ost::gfx::map_iso
AddLinesAndFaces< 189 >() :
ost::gfx::map_iso
AddLinesAndFaces< 19 >() :
ost::gfx::map_iso
AddLinesAndFaces< 190 >() :
ost::gfx::map_iso
AddLinesAndFaces< 191 >() :
ost::gfx::map_iso
AddLinesAndFaces< 192 >() :
ost::gfx::map_iso
AddLinesAndFaces< 193 >() :
ost::gfx::map_iso
AddLinesAndFaces< 194 >() :
ost::gfx::map_iso
AddLinesAndFaces< 195 >() :
ost::gfx::map_iso
AddLinesAndFaces< 196 >() :
ost::gfx::map_iso
AddLinesAndFaces< 197 >() :
ost::gfx::map_iso
AddLinesAndFaces< 198 >() :
ost::gfx::map_iso
AddLinesAndFaces< 199 >() :
ost::gfx::map_iso
AddLinesAndFaces< 2 >() :
ost::gfx::map_iso
AddLinesAndFaces< 20 >() :
ost::gfx::map_iso
AddLinesAndFaces< 200 >() :
ost::gfx::map_iso
AddLinesAndFaces< 201 >() :
ost::gfx::map_iso
AddLinesAndFaces< 202 >() :
ost::gfx::map_iso
AddLinesAndFaces< 203 >() :
ost::gfx::map_iso
AddLinesAndFaces< 204 >() :
ost::gfx::map_iso
AddLinesAndFaces< 205 >() :
ost::gfx::map_iso
AddLinesAndFaces< 206 >() :
ost::gfx::map_iso
AddLinesAndFaces< 207 >() :
ost::gfx::map_iso
AddLinesAndFaces< 208 >() :
ost::gfx::map_iso
AddLinesAndFaces< 209 >() :
ost::gfx::map_iso
AddLinesAndFaces< 21 >() :
ost::gfx::map_iso
AddLinesAndFaces< 210 >() :
ost::gfx::map_iso
AddLinesAndFaces< 211 >() :
ost::gfx::map_iso
AddLinesAndFaces< 212 >() :
ost::gfx::map_iso
AddLinesAndFaces< 213 >() :
ost::gfx::map_iso
AddLinesAndFaces< 214 >() :
ost::gfx::map_iso
AddLinesAndFaces< 215 >() :
ost::gfx::map_iso
AddLinesAndFaces< 216 >() :
ost::gfx::map_iso
AddLinesAndFaces< 217 >() :
ost::gfx::map_iso
AddLinesAndFaces< 218 >() :
ost::gfx::map_iso
AddLinesAndFaces< 219 >() :
ost::gfx::map_iso
AddLinesAndFaces< 22 >() :
ost::gfx::map_iso
AddLinesAndFaces< 220 >() :
ost::gfx::map_iso
AddLinesAndFaces< 221 >() :
ost::gfx::map_iso
AddLinesAndFaces< 222 >() :
ost::gfx::map_iso
AddLinesAndFaces< 223 >() :
ost::gfx::map_iso
AddLinesAndFaces< 224 >() :
ost::gfx::map_iso
AddLinesAndFaces< 225 >() :
ost::gfx::map_iso
AddLinesAndFaces< 226 >() :
ost::gfx::map_iso
AddLinesAndFaces< 227 >() :
ost::gfx::map_iso
AddLinesAndFaces< 228 >() :
ost::gfx::map_iso
AddLinesAndFaces< 229 >() :
ost::gfx::map_iso
AddLinesAndFaces< 23 >() :
ost::gfx::map_iso
AddLinesAndFaces< 230 >() :
ost::gfx::map_iso
AddLinesAndFaces< 231 >() :
ost::gfx::map_iso
AddLinesAndFaces< 232 >() :
ost::gfx::map_iso
AddLinesAndFaces< 233 >() :
ost::gfx::map_iso
AddLinesAndFaces< 234 >() :
ost::gfx::map_iso
AddLinesAndFaces< 235 >() :
ost::gfx::map_iso
AddLinesAndFaces< 236 >() :
ost::gfx::map_iso
AddLinesAndFaces< 237 >() :
ost::gfx::map_iso
AddLinesAndFaces< 238 >() :
ost::gfx::map_iso
AddLinesAndFaces< 239 >() :
ost::gfx::map_iso
AddLinesAndFaces< 24 >() :
ost::gfx::map_iso
AddLinesAndFaces< 240 >() :
ost::gfx::map_iso
AddLinesAndFaces< 241 >() :
ost::gfx::map_iso
AddLinesAndFaces< 242 >() :
ost::gfx::map_iso
AddLinesAndFaces< 243 >() :
ost::gfx::map_iso
AddLinesAndFaces< 244 >() :
ost::gfx::map_iso
AddLinesAndFaces< 245 >() :
ost::gfx::map_iso
AddLinesAndFaces< 246 >() :
ost::gfx::map_iso
AddLinesAndFaces< 247 >() :
ost::gfx::map_iso
AddLinesAndFaces< 248 >() :
ost::gfx::map_iso
AddLinesAndFaces< 249 >() :
ost::gfx::map_iso
AddLinesAndFaces< 25 >() :
ost::gfx::map_iso
AddLinesAndFaces< 250 >() :
ost::gfx::map_iso
AddLinesAndFaces< 251 >() :
ost::gfx::map_iso
AddLinesAndFaces< 252 >() :
ost::gfx::map_iso
AddLinesAndFaces< 253 >() :
ost::gfx::map_iso
AddLinesAndFaces< 254 >() :
ost::gfx::map_iso
AddLinesAndFaces< 255 >() :
ost::gfx::map_iso
AddLinesAndFaces< 26 >() :
ost::gfx::map_iso
AddLinesAndFaces< 27 >() :
ost::gfx::map_iso
AddLinesAndFaces< 28 >() :
ost::gfx::map_iso
AddLinesAndFaces< 29 >() :
ost::gfx::map_iso
AddLinesAndFaces< 3 >() :
ost::gfx::map_iso
AddLinesAndFaces< 30 >() :
ost::gfx::map_iso
AddLinesAndFaces< 31 >() :
ost::gfx::map_iso
AddLinesAndFaces< 32 >() :
ost::gfx::map_iso
AddLinesAndFaces< 33 >() :
ost::gfx::map_iso
AddLinesAndFaces< 34 >() :
ost::gfx::map_iso
AddLinesAndFaces< 35 >() :
ost::gfx::map_iso
AddLinesAndFaces< 36 >() :
ost::gfx::map_iso
AddLinesAndFaces< 37 >() :
ost::gfx::map_iso
AddLinesAndFaces< 38 >() :
ost::gfx::map_iso
AddLinesAndFaces< 39 >() :
ost::gfx::map_iso
AddLinesAndFaces< 4 >() :
ost::gfx::map_iso
AddLinesAndFaces< 40 >() :
ost::gfx::map_iso
AddLinesAndFaces< 41 >() :
ost::gfx::map_iso
AddLinesAndFaces< 42 >() :
ost::gfx::map_iso
AddLinesAndFaces< 43 >() :
ost::gfx::map_iso
AddLinesAndFaces< 44 >() :
ost::gfx::map_iso
AddLinesAndFaces< 45 >() :
ost::gfx::map_iso
AddLinesAndFaces< 46 >() :
ost::gfx::map_iso
AddLinesAndFaces< 47 >() :
ost::gfx::map_iso
AddLinesAndFaces< 48 >() :
ost::gfx::map_iso
AddLinesAndFaces< 49 >() :
ost::gfx::map_iso
AddLinesAndFaces< 5 >() :
ost::gfx::map_iso
AddLinesAndFaces< 50 >() :
ost::gfx::map_iso
AddLinesAndFaces< 51 >() :
ost::gfx::map_iso
AddLinesAndFaces< 52 >() :
ost::gfx::map_iso
AddLinesAndFaces< 53 >() :
ost::gfx::map_iso
AddLinesAndFaces< 54 >() :
ost::gfx::map_iso
AddLinesAndFaces< 55 >() :
ost::gfx::map_iso
AddLinesAndFaces< 56 >() :
ost::gfx::map_iso
AddLinesAndFaces< 57 >() :
ost::gfx::map_iso
AddLinesAndFaces< 58 >() :
ost::gfx::map_iso
AddLinesAndFaces< 59 >() :
ost::gfx::map_iso
AddLinesAndFaces< 6 >() :
ost::gfx::map_iso
AddLinesAndFaces< 60 >() :
ost::gfx::map_iso
AddLinesAndFaces< 61 >() :
ost::gfx::map_iso
AddLinesAndFaces< 62 >() :
ost::gfx::map_iso
AddLinesAndFaces< 63 >() :
ost::gfx::map_iso
AddLinesAndFaces< 64 >() :
ost::gfx::map_iso
AddLinesAndFaces< 65 >() :
ost::gfx::map_iso
AddLinesAndFaces< 66 >() :
ost::gfx::map_iso
AddLinesAndFaces< 67 >() :
ost::gfx::map_iso
AddLinesAndFaces< 68 >() :
ost::gfx::map_iso
AddLinesAndFaces< 69 >() :
ost::gfx::map_iso
AddLinesAndFaces< 7 >() :
ost::gfx::map_iso
AddLinesAndFaces< 70 >() :
ost::gfx::map_iso
AddLinesAndFaces< 71 >() :
ost::gfx::map_iso
AddLinesAndFaces< 72 >() :
ost::gfx::map_iso
AddLinesAndFaces< 73 >() :
ost::gfx::map_iso
AddLinesAndFaces< 74 >() :
ost::gfx::map_iso
AddLinesAndFaces< 75 >() :
ost::gfx::map_iso
AddLinesAndFaces< 76 >() :
ost::gfx::map_iso
AddLinesAndFaces< 77 >() :
ost::gfx::map_iso
AddLinesAndFaces< 78 >() :
ost::gfx::map_iso
AddLinesAndFaces< 79 >() :
ost::gfx::map_iso
AddLinesAndFaces< 8 >() :
ost::gfx::map_iso
AddLinesAndFaces< 80 >() :
ost::gfx::map_iso
AddLinesAndFaces< 81 >() :
ost::gfx::map_iso
AddLinesAndFaces< 82 >() :
ost::gfx::map_iso
AddLinesAndFaces< 83 >() :
ost::gfx::map_iso
AddLinesAndFaces< 84 >() :
ost::gfx::map_iso
AddLinesAndFaces< 85 >() :
ost::gfx::map_iso
AddLinesAndFaces< 86 >() :
ost::gfx::map_iso
AddLinesAndFaces< 87 >() :
ost::gfx::map_iso
AddLinesAndFaces< 88 >() :
ost::gfx::map_iso
AddLinesAndFaces< 89 >() :
ost::gfx::map_iso
AddLinesAndFaces< 9 >() :
ost::gfx::map_iso
AddLinesAndFaces< 90 >() :
ost::gfx::map_iso
AddLinesAndFaces< 91 >() :
ost::gfx::map_iso
AddLinesAndFaces< 92 >() :
ost::gfx::map_iso
AddLinesAndFaces< 93 >() :
ost::gfx::map_iso
AddLinesAndFaces< 94 >() :
ost::gfx::map_iso
AddLinesAndFaces< 95 >() :
ost::gfx::map_iso
AddLinesAndFaces< 96 >() :
ost::gfx::map_iso
AddLinesAndFaces< 97 >() :
ost::gfx::map_iso
AddLinesAndFaces< 98 >() :
ost::gfx::map_iso
AddLinesAndFaces< 99 >() :
ost::gfx::map_iso
AddMenuAction() :
ost::gui
AlignmentFromChainView() :
ost::seq::alg
AlignmentFromSequenceList() :
ost::seq
AlignmentFromStream() :
ost::io
AlignmentFromString() :
ost::io
AlignmentToString() :
ost::io
AlignStructures() :
ost::bindings::align_3dcomb
AlignToSEQRES() :
ost::seq::alg
AminoAcidToResidueName() :
ost::conop
AnalyzeAlphaHelixAxis() :
ost::mol::alg
AnalyzeAngle() :
ost::mol::alg
AnalyzeAromaticRingInteraction() :
ost::mol::alg
AnalyzeAtomPos() :
ost::mol::alg
AnalyzeBestFitLine() :
ost::mol::alg
AnalyzeBestFitPlane() :
ost::mol::alg
AnalyzeCenterOfMassPos() :
ost::mol::alg
AnalyzeDihedralAngle() :
ost::mol::alg
AnalyzeDistanceBetwAtoms() :
ost::mol::alg
AnalyzeDistanceBetwCenterOfMass() :
ost::mol::alg
AnalyzeDistanceFluctuationMatrix() :
ost::mol::alg::trajectory_analysis
AnalyzeHBondScore() :
ost::mol::alg::hbond
AnalyzeHelicity() :
ost::mol::alg
AnalyzeHelixKink() :
ost::mol::alg::helix_kinks
AnalyzeMinDistance() :
ost::mol::alg
AnalyzeMinDistanceBetwCenterOfMassAndView() :
ost::mol::alg
AnalyzeRMSD() :
ost::mol::alg
AnalyzeRMSF() :
ost::mol::alg
Angle() :
geom
AreHBonded() :
ost::mol::alg::hbond
AreIntersecting() :
geom
AreParallel() :
geom
AssignBackboneTorsions() :
ost::conop
AssignDSSP() :
ost::bindings::dssp
AverageDistanceMatrixFromTraj() :
ost::mol::alg::trajectory_analysis
AxisRotation() :
geom
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