Namespaces | |
namespace | detail |
namespace | impl |
namespace | map_iso |
namespace | py_gfx_obj |
namespace | RenderMode |
Data Structures | |
struct | Bitmap |
class | ColladaExporter |
class | Color |
class | BasicGradientColorOp |
class | ByChainColorOp |
class | ByElementColorOp |
class | ColorOp |
class | EntityViewColorOp |
class | GradientColorOp |
class | GradientLevelColorOp |
class | MapHandleColorOp |
class | UniformColorOp |
class | Entity |
graphical rendering of mol::EntityHandle entites More... | |
class | Exporter |
class | GfxNode |
class | GfxNodeVisitor |
class | GfxObj |
main class for all graphic objects More... | |
class | GfxObjBase |
main interface for all graphic objects, both in C++ and Python More... | |
struct | SpherePrim |
struct | CylinderPrim |
struct | TextPrim |
class | GfxTestObj |
class | GLWinBase |
class | GostExporter |
class | Gradient |
color gradient More... | |
class | GradientManager |
class | OffscreenBuffer |
class | InputEvent |
class | MapIso |
isocontour rendering for 3D image data More... | |
class | MapSlab |
Render slice of 3d image. More... | |
class | Material |
class | OffscreenBufferFormat |
class | PovState |
class | PrimList |
class | Primitive |
base class for geometric primitives such as cuboids, and circles More... | |
class | Cuboid |
a rendered cuboid in 3D space More... | |
class | Quad |
a simple rendered quad in 3D space. More... | |
class | CartoonRenderOptions |
class | CPKRenderOptions |
class | CustomRenderOptions |
class | LineRenderOptions |
class | LineTraceRenderOptions |
class | RenderOptions |
class | SimpleRenderOptions |
class | SlineRenderOptions |
class | TraceRenderOptions |
struct | Viewport |
class | Scene |
main class for organization and root for the graphical display More... | |
class | SceneObserver |
Interface for observing graphical objects. More... | |
class | Selection |
class | Surface |
class | SymmetryOp |
class | SymmetryNode |
renders all child nodes and the symmetry related copies More... | |
class | Texture |
class | IndexedVertexArray |
class | GfxNodeListAttrProxy |
class | GfxNodeListProxy |
Typedefs | |
typedef unsigned char | ColorMask |
typedef boost::shared_ptr < UniformColorOp > | UniformColorOpP |
typedef std::vector < RenderMode::Type > | RenderModeTypes |
typedef boost::shared_ptr< Entity > | EntityP |
typedef boost::weak_ptr< Entity > | EntityW |
typedef std::vector< GfxNodeP > | GfxNodeVector |
typedef boost::shared_ptr < GfxNode > | GfxNodeP |
typedef std::vector< GfxNodeP > | NodePtrList |
typedef boost::shared_ptr < GfxObjBase > | GfxObjBaseP |
typedef boost::shared_ptr< GfxObj > | GfxObjP |
typedef std::vector< SpherePrim > | SpherePrimList |
typedef std::vector< CylinderPrim > | CylinderPrimList |
typedef std::vector< TextPrim > | TextPrimList |
typedef boost::shared_ptr< MapIso > | MapIsoP |
typedef boost::shared_ptr < MapSlab > | MapSlabP |
typedef boost::shared_ptr < CartoonRenderOptions > | CartoonRenderOptionsPtr |
typedef boost::shared_ptr < CPKRenderOptions > | CPKRenderOptionsPtr |
typedef boost::shared_ptr < CustomRenderOptions > | CustomRenderOptionsPtr |
typedef boost::shared_ptr < LineRenderOptions > | LineRenderOptionsPtr |
typedef boost::shared_ptr < LineTraceRenderOptions > | LineTraceRenderOptionsPtr |
typedef boost::shared_ptr < RenderOptions > | RenderOptionsPtr |
typedef boost::shared_ptr < SimpleRenderOptions > | SimpleRenderOptionsPtr |
typedef boost::shared_ptr < SlineRenderOptions > | SlineRenderOptionsPtr |
typedef boost::shared_ptr < TraceRenderOptions > | TraceRenderOptionsPtr |
typedef std::vector < SceneObserver * > | SceneObserverList |
typedef boost::shared_ptr < Surface > | SurfaceP |
typedef std::vector< SymmetryOp > | SymmetryOpList |
typedef unsigned int | VertexID |
typedef unsigned int | LineID |
typedef unsigned int | TriID |
typedef unsigned int | QuadID |
Enumerations | |
enum | ColorBit { DETAIL_COLOR = 1, MAIN_COLOR = 2 } |
enum | InputDevice { INPUT_DEVICE_DUMMY = 0, INPUT_DEVICE_MOUSE } |
enum | InputCommand { INPUT_COMMAND_NONE = 0, INPUT_COMMAND_ROTX, INPUT_COMMAND_ROTY, INPUT_COMMAND_ROTZ, INPUT_COMMAND_TRANSX, INPUT_COMMAND_TRANSY, INPUT_COMMAND_TRANSZ, INPUT_COMMAND_SLABN, INPUT_COMMAND_SLABF, INPUT_COMMAND_AUTOSLAB, INPUT_COMMAND_TOGGLE_FOG, INPUT_COMMAND_CUSTOM1, INPUT_COMMAND_CUSTOM2, INPUT_COMMAND_CUSTOM3, INPUT_COMMAND_REBUILD } |
enum | TransformTarget { TRANSFORM_VIEW = 0, TRANSFORM_RIGID, TRANSFORM_TORSION, TRANSFORM_ANGLE, TRANSFORM_ROTAMER } |
enum | MapIsoType { ORIGINAL_MAP, DOWNSAMPLED_MAP } |
enum | RenderPass { STANDARD_RENDER_PASS, GLOW_RENDER_PASS, DEPTH_RENDER_PASS, TRANSPARENT_RENDER_PASS, OVERLAY_RENDER_PASS } |
Functions | |
void DLLEXPORT_OST_GFX | ExportBitmap (const String &fname, std::string ext, unsigned int width, unsigned int height, unsigned char *data) |
Bitmap DLLEXPORT_OST_GFX | ImportBitmap (const String &fname, std::string ext="") |
Color DLLEXPORT_OST_GFX | RGB (float r, float g, float b) |
Color DLLEXPORT_OST_GFX | RGBb (uchar r, uchar g, uchar b) |
Color DLLEXPORT_OST_GFX | RGBi (unsigned int r, unsigned int g, unsigned int b) |
Color DLLEXPORT_OST_GFX | RGBA (float r, float g, float b, float a) |
Color DLLEXPORT_OST_GFX | RGBAb (uchar r, uchar g, uchar b, uchar a) |
Color DLLEXPORT_OST_GFX | RGBAi (unsigned int r, unsigned int g, unsigned int b, unsigned int a) |
Color DLLEXPORT_OST_GFX | HSV (float h, float s, float v) |
Color DLLEXPORT_OST_GFX | HSVi (int h, int s, int v) |
Color DLLEXPORT_OST_GFX | HSVA (float h, float s, float v, float a) |
Color DLLEXPORT_OST_GFX | HSVAi (int h, int s, int v, int a) |
DLLEXPORT_OST_GFX std::ostream & | operator<< (std::ostream &, const Color &c) |
def | Stereo |
def | FitToScreen |
def | GostExporter |
def | ColladaExporter |
Variables | |
static const unsigned int | VA_SPHERE_MAX_DETAIL = 12 |
static const unsigned int | VA_ICO_SPHERE_MAX_DETAIL = 4 |
static const unsigned int | VA_CYL_MAX_DETAIL = 12 |
tuple | WHITE = RGB(1.0,1.0,1.0) |
tuple | BLACK = RGB(0.0,0.0,0.0) |
tuple | GREY = RGB(0.5,0.5,0.5) |
tuple | RED = RGB(1.0,0.0,0.0) |
tuple | DARKRED = RGB(0.5,0.0,0.0) |
tuple | LIGHTRED = RGB(1.0,0.5,0.5) |
tuple | GREEN = RGB(0.0,1.0,0.0) |
tuple | DARKGREEN = RGB(0.0,0.5,0.0) |
tuple | LIGHTGREEN = RGB(0.5,1.0,0.5) |
tuple | BLUE = RGB(0.0,0.0,1.0) |
tuple | DARKBLUE = RGB(0.0,0.0,0.5) |
tuple | LIGHTBLUE = RGB(0.5,0.5,1.0) |
tuple | YELLOW = RGB(1.0,1.0,0.0) |
tuple | DARKYELLOW = RGB(0.5,0.5,0.0) |
tuple | LIGHTYELLOW = RGB(1.0,1.0,0.5) |
tuple | CYAN = RGB(0.0,1.0,1.0) |
tuple | DARKCYAN = RGB(0.0,0.5,0.5) |
tuple | LIGHTCYAN = RGB(0.5,1.0,1.0) |
tuple | MAGENTA = RGB(1.0,0.0,1.0) |
tuple | DARKMAGENTA = RGB(0.5,0.0,0.5) |
tuple | LIGHTMAGENTA = RGB(1.0,0.5,1.0) |
PURPLE = MAGENTA | |
DARKPURPLE = DARKMAGENTA | |
LIGHTPURPLE = LIGHTMAGENTA | |
tuple | ORANGE = RGB(1.0,0.5,0.0) |
tuple | DARKORANGE = RGB(0.5,0.25,0.0) |
tuple | LIGHTORANGE = RGB(1.0,0.75,0.5) |
typedef boost::shared_ptr<CartoonRenderOptions> CartoonRenderOptionsPtr |
Definition at line 137 of file cartoon_render_options.hh.
typedef unsigned char ColorMask |
Definition at line 43 of file color_op.hh.
typedef boost::shared_ptr<CPKRenderOptions> CPKRenderOptionsPtr |
Definition at line 62 of file cpk_render_options.hh.
typedef boost::shared_ptr<CustomRenderOptions> CustomRenderOptionsPtr |
Definition at line 62 of file custom_render_options.hh.
typedef std::vector<CylinderPrim> CylinderPrimList |
Definition at line 105 of file gfx_prim.hh.
Definition at line 27 of file entity_fw.hh.
Definition at line 29 of file entity_fw.hh.
Definition at line 31 of file gfx_node_fw.hh.
typedef std::vector<GfxNodeP> GfxNodeVector |
Definition at line 41 of file gfx_node.hh.
typedef boost::shared_ptr<GfxObjBase> GfxObjBaseP |
Definition at line 30 of file gfx_object_fw.hh.
Definition at line 32 of file gfx_object_fw.hh.
typedef unsigned int LineID |
Definition at line 47 of file vertex_array.hh.
typedef boost::shared_ptr<LineRenderOptions> LineRenderOptionsPtr |
Definition at line 53 of file line_render_options.hh.
typedef boost::shared_ptr<LineTraceRenderOptions> LineTraceRenderOptionsPtr |
Definition at line 43 of file line_trace_render_options.hh.
Definition at line 43 of file map_iso.hh.
Definition at line 38 of file map_slab.hh.
typedef std::vector<GfxNodeP> NodePtrList |
Definition at line 34 of file gfx_node_fw.hh.
typedef unsigned int QuadID |
Definition at line 49 of file vertex_array.hh.
typedef std::vector<RenderMode::Type> RenderModeTypes |
typedef boost::shared_ptr<RenderOptions> RenderOptionsPtr |
Definition at line 37 of file render_options.hh.
typedef std::vector<SceneObserver*> SceneObserverList |
typedef boost::shared_ptr<SimpleRenderOptions> SimpleRenderOptionsPtr |
Definition at line 59 of file simple_render_options.hh.
typedef boost::shared_ptr<SlineRenderOptions> SlineRenderOptionsPtr |
Definition at line 50 of file sline_render_options.hh.
typedef std::vector<SpherePrim> SpherePrimList |
Definition at line 47 of file gfx_prim.hh.
Definition at line 46 of file surface.hh.
typedef std::vector<SymmetryOp> SymmetryOpList |
Definition at line 45 of file symmetry_node.hh.
typedef std::vector<TextPrim> TextPrimList |
Definition at line 117 of file gfx_prim.hh.
typedef boost::shared_ptr<TraceRenderOptions> TraceRenderOptionsPtr |
Definition at line 60 of file trace_render_options.hh.
typedef unsigned int TriID |
Definition at line 48 of file vertex_array.hh.
typedef boost::shared_ptr<UniformColorOp> UniformColorOpP |
Definition at line 57 of file uniform_color_op.hh.
typedef unsigned int VertexID |
Definition at line 46 of file vertex_array.hh.
enum ColorBit |
Definition at line 38 of file color_op.hh.
enum InputCommand |
enum InputDevice |
enum MapIsoType |
Definition at line 38 of file map_iso.hh.
enum RenderPass |
Definition at line 27 of file render_pass.hh.
enum TransformTarget |
def ost::gfx::ColladaExporter | ( | file, | ||
scale = 1.0 , |
||||
to_origin = True | ||||
) |
Definition at line 404 of file __init__.py.
void DLLEXPORT_OST_GFX ost::gfx::ExportBitmap | ( | const String & | fname, | |
std::string | ext, | |||
unsigned int | width, | |||
unsigned int | height, | |||
unsigned char * | data | |||
) |
def ost::gfx::FitToScreen | ( | gfx_ent, | ||
width = None , |
||||
height = None , |
||||
margin = 0.05 | ||||
) |
Setup camera such that it is centered on the graphical entity and the entity fits the entire viewport. The longest axes of the entity are aligned along the x- and y- axes of the screen. :param gfx_ent: The graphical entity :type gfx_ent: str or :class:`Entity`
Definition at line 68 of file __init__.py.
def ost::gfx::GostExporter | ( | file, | ||
scale = 1.0 , |
||||
to_origin = True | ||||
) |
Definition at line 398 of file __init__.py.
Color DLLEXPORT_OST_GFX ost::gfx::HSV | ( | float | h, | |
float | s, | |||
float | v | |||
) |
HSV color spec from floats.
h: Hue from 0 to 1 (0=red, 2/6=green, 4/6=blue) outside values are modulus 1, not clamped s: Saturation from 0 (no color) to 1 (full color) outside values are clamped v: Value from 0 (no light, black) to 1 (full light) outside values are clamped
out-of-bounds values are perfectly fine, as they are sometimes needed in hsv gradients, e.g.
g1=gfx.Gradient([gfx.HSV(-60.0/360.0,1,1),gfx.HSV(60.0/360.0,1,1)]) g1.hsv_mode=True g2=gfx.Gradient([gfx.HSV(300.0/360.0,1,1),gfx.HSV(420.0/360.0,1,1)]) g2.hsv_mode=True
both will blend from purple to yellow via red
Color DLLEXPORT_OST_GFX ost::gfx::HSVA | ( | float | h, | |
float | s, | |||
float | v, | |||
float | a | |||
) |
HSVA color spec from floats.
see HSV(float,float,float); alpha from 0 to 1
Color DLLEXPORT_OST_GFX ost::gfx::HSVAi | ( | int | h, | |
int | s, | |||
int | v, | |||
int | a | |||
) |
HSVA color spec from integers.
see HSVi(int, int, int); alpha from 0 to 100
Color DLLEXPORT_OST_GFX ost::gfx::HSVi | ( | int | h, | |
int | s, | |||
int | v | |||
) |
HSV color spec from integers.
h: Hue from 0 to 359 (0=red, 120=green, 240=blue) outside values are modulus 360, not clamped s: Saturation from 0 (no color) to 100 (full color) outside values are clamped v: Value from 0 (no light, black) to 100 (full light) outside values are clamped
signed integers on purpose, allows negative values to be used for hsv gradients, see comments for HSV(float,float,float)
DLLEXPORT_OST_GFX std::ostream& ost::gfx::operator<< | ( | std::ostream & | , | |
const Color & | c | |||
) |
string form
Color DLLEXPORT_OST_GFX ost::gfx::RGB | ( | float | r, | |
float | g, | |||
float | b | |||
) |
RGB color spec from floats (0.0-1.0).
Color DLLEXPORT_OST_GFX ost::gfx::RGBA | ( | float | r, | |
float | g, | |||
float | b, | |||
float | a | |||
) |
RGBA color spec from floats (0.0-1.0).
RGBA color spec from bytes (0-255).
Color DLLEXPORT_OST_GFX ost::gfx::RGBAi | ( | unsigned int | r, | |
unsigned int | g, | |||
unsigned int | b, | |||
unsigned int | a | |||
) |
RGBA color spec from integers (0-65535).
RGB color spec from bytes (0-255).
Color DLLEXPORT_OST_GFX ost::gfx::RGBi | ( | unsigned int | r, | |
unsigned int | g, | |||
unsigned int | b | |||
) |
RGB color spec from integers (0-65535).
def ost::gfx::Stereo | ( | mode, | ||
flip = None , |
||||
alg = None | ||||
) |
Stereo control :param mode: 0=off, 1=quad-buffered, 2=interlaced :type mode: int :param flip: invert order of left/right display :type flip: bool :param alg: stereo algorithm (0 or 1) :type param: int
Definition at line 50 of file __init__.py.
tuple BLACK = RGB(0.0,0.0,0.0) |
Definition at line 23 of file __init__.py.
tuple BLUE = RGB(0.0,0.0,1.0) |
Definition at line 31 of file __init__.py.
tuple CYAN = RGB(0.0,1.0,1.0) |
Definition at line 37 of file __init__.py.
tuple DARKBLUE = RGB(0.0,0.0,0.5) |
Definition at line 32 of file __init__.py.
tuple DARKCYAN = RGB(0.0,0.5,0.5) |
Definition at line 38 of file __init__.py.
tuple DARKGREEN = RGB(0.0,0.5,0.0) |
Definition at line 29 of file __init__.py.
tuple DARKMAGENTA = RGB(0.5,0.0,0.5) |
Definition at line 41 of file __init__.py.
tuple DARKORANGE = RGB(0.5,0.25,0.0) |
Definition at line 47 of file __init__.py.
Definition at line 44 of file __init__.py.
tuple DARKRED = RGB(0.5,0.0,0.0) |
Definition at line 26 of file __init__.py.
tuple DARKYELLOW = RGB(0.5,0.5,0.0) |
Definition at line 35 of file __init__.py.
tuple GREEN = RGB(0.0,1.0,0.0) |
Definition at line 28 of file __init__.py.
tuple GREY = RGB(0.5,0.5,0.5) |
Definition at line 24 of file __init__.py.
tuple LIGHTBLUE = RGB(0.5,0.5,1.0) |
Definition at line 33 of file __init__.py.
tuple LIGHTCYAN = RGB(0.5,1.0,1.0) |
Definition at line 39 of file __init__.py.
tuple LIGHTGREEN = RGB(0.5,1.0,0.5) |
Definition at line 30 of file __init__.py.
tuple LIGHTMAGENTA = RGB(1.0,0.5,1.0) |
Definition at line 42 of file __init__.py.
tuple LIGHTORANGE = RGB(1.0,0.75,0.5) |
Definition at line 48 of file __init__.py.
Definition at line 45 of file __init__.py.
tuple LIGHTRED = RGB(1.0,0.5,0.5) |
Definition at line 27 of file __init__.py.
tuple LIGHTYELLOW = RGB(1.0,1.0,0.5) |
Definition at line 36 of file __init__.py.
tuple MAGENTA = RGB(1.0,0.0,1.0) |
Definition at line 40 of file __init__.py.
tuple ORANGE = RGB(1.0,0.5,0.0) |
Definition at line 46 of file __init__.py.
Definition at line 43 of file __init__.py.
tuple RED = RGB(1.0,0.0,0.0) |
Definition at line 25 of file __init__.py.
const unsigned int VA_CYL_MAX_DETAIL = 12 [static] |
Definition at line 29 of file vertex_array_helper.hh.
const unsigned int VA_ICO_SPHERE_MAX_DETAIL = 4 [static] |
Definition at line 28 of file vertex_array_helper.hh.
const unsigned int VA_SPHERE_MAX_DETAIL = 12 [static] |
Definition at line 27 of file vertex_array_helper.hh.
tuple WHITE = RGB(1.0,1.0,1.0) |
Definition at line 22 of file __init__.py.
tuple YELLOW = RGB(1.0,1.0,0.0) |
Definition at line 34 of file __init__.py.