ost::img::alg Namespace Reference

Data Structures

struct  MirrorFnc
class  ShiftFnc
struct  TransformFnc
class  AnisotropicFilter
class  AutoCorrelateFnc
struct  ConjFnc
class  ExplicitConvoluteFnc
class  ExplicitCorrelateFnc
class  CrossCorrelate
struct  SliceFnc
class  DFT
struct  DiscreteShrinkFnc
 shrink image by integral amount More...
struct  FFTException
struct  FFTFnc
class  LowPassFilter
 Low Pass Filter. More...
class  HighPassFilter
 High Pass Filter. More...
class  GaussianLowPassFilter
 Gaussian Low Pass Filter. More...
class  GaussianHighPassFilter
 Gaussian High Pass Filter. More...
class  FermiLowPassFilter
 Fermi Low Pass Filter. More...
class  FermiHighPassFilter
 Fermi High Pass Filter. More...
class  ButterworthLowPassFilter
 Butterworth Low Pass Filter. More...
class  ButterworthHighPassFilter
 Butterworth High Pass Filter. More...
class  FractionalShift
class  GaussianFilterBase
 Gaussian Filter. More...
class  GaussianGradientMagnitudeFilterBase
 First Derivative Gaussian Filter. More...
class  GaussianLaplacianFilterBase
 Gaussian Filter. More...
class  HighestPeakSearch3DBase
class  HistogramError
class  HistogramBase
class  LineAverageBase
 computes mean value of columns or lines More...
class  LineIterator
 line iterator generator More...
class  LocalSigmaThresholdBase
class  MaskImageBase
class  LinearNormalizer
 linear normalization More...
class  LinearRangeNormalizer
class  LogNormalizer
 log normalization More...
class  LogRangeNormalizer
class  TransmissionToODNormalizer
class  Normalizer
class  Polar
class  EllipticPolar
class  Cartesian
class  PowerSpectrumFnc
struct  RandomizeFnc
class  SmoothMaskImageBase
class  StatBase
class  StatAccumulator
class  StatMinMaxBase
struct  CosFnc
struct  ExpFnc
struct  LogFnc
struct  Log10Fnc
struct  SinFnc
struct  SqrtFnc
struct  TanFnc
struct  PowFnc
class  Transformation
 transformation base class More...
class  Rotate2D
 rotate in XY plane More...
class  Rotate2D90
 rotate 90 degree CW in XY plane More...
class  Scale
 apply scale More...
class  Translate
 apply translation More...

Typedefs

typedef
ImageStateConstModOPAlgorithm
< MirrorFnc > 		Mirror
typedef
ImageStateConstModOPAlgorithm
< ShiftFnc > 		Shift
typedef
ImageStateConstModOPAlgorithm
< TransformFnc > 		Transform
typedef
ImageStateConstModOPAlgorithm
< AutoCorrelateFnc > 		AutoCorrelate
typedef
ImageStateConstModIPAlgorithm
< ClearFnc > 		Clear
typedef
ImageStateConstModIPAlgorithm
< ClipMinMaxFnc > 		ClipMinMax
typedef
ImageStateConstModIPAlgorithm
< ConjFnc > 		Conj
typedef
ImageStateConstModOPAlgorithm
< ExplicitConvoluteFnc > 		ExplicitConvolute
typedef
ImageStateConstModOPAlgorithm
< ExplicitCorrelateFnc > 		ExplicitCorrelate
typedef
ImageStateConstModIPAlgorithm
< SliceFnc > 		DensitySlice
typedef
ImageStateConstModOPAlgorithm
< DiscreteShrinkFnc > 		DiscreteShrink
typedef
image_state::ImageStateConstModOPAlgorithm
< FFTFnc > 		FFT
typedef
ImageStateConstModIPAlgorithm
< FillFnc > 		Fill
typedef
ImageStateModIPAlgorithm
< GaussianFilterBase > 		GaussianFilter
typedef
ImageStateModIPAlgorithm
< GaussianGradientMagnitudeFilterBase > 		GaussianGradientMagnitudeFilter
typedef
ImageStateModIPAlgorithm
< GaussianLaplacianFilterBase > 		GaussianLaplacianFilter
typedef
ImageStateNonModAlgorithm
< HighestPeakSearch3DBase > 		HighestPeakSearch3D
typedef
ImageStateNonModAlgorithm
< HistogramBase > 		Histogram
typedef
image_state::ImageStateConstModOPAlgorithm
< alg::LineAverageBase > 		LineAverage
typedef
ImageStateConstModOPAlgorithm
< LocalSigmaThresholdBase > 		LocalSigmaThreshold
typedef
ImageStateConstModIPAlgorithm
< MaskImageBase > 		MaskImage
typedef
ImageStateConstModIPAlgorithm
< NegateFnc > 		Negate
typedef
ImageStateConstModOPAlgorithm
< PowerSpectrumFnc > 		PowerSpectrum
typedef
ImageStateConstModIPAlgorithm
< RandomizeFnc > 		Randomize
typedef
ImageStateModIPAlgorithm
< SmoothMaskImageBase > 		SmoothMaskImage
typedef
ImageStateNonModAlgorithm
< StatBase > 		Stat
typedef
ImageStateNonModAlgorithm
< StatMinMaxBase > 		StatMinMax
typedef
ImageStateConstModIPAlgorithm
< ThresholdFnc > 		Threshold
typedef
ImageStateConstModIPAlgorithm
< CosFnc > 		Cos
typedef
ImageStateConstModIPAlgorithm
< ExpFnc > 		Exp
typedef
ImageStateConstModIPAlgorithm
< LogFnc > 		Log
typedef
ImageStateConstModIPAlgorithm
< Log10Fnc > 		Log10
typedef
ImageStateConstModIPAlgorithm
< SinFnc > 		Sin
typedef
ImageStateConstModIPAlgorithm
< SqrtFnc > 		Sqrt
typedef
ImageStateConstModIPAlgorithm
< TanFnc > 		Tan
typedef
ImageStateConstModIPAlgorithm
< PowFnc > 		Pow

Functions

DLLIMPORT Normalizer CreateNoOpNormalizer ()
DLLIMPORT Normalizer CreateLinearNormalizer (Real scale, Real offset)
DLLIMPORT Normalizer CreateLinearRangeNormalizer (const ConstImageHandle &ih, Real minoutput, Real maxoutput)
DLLIMPORT Normalizer CreateLinearRangeNormalizer (Real mininput, Real maxinput, Real minoutput, Real maxoutput)
DLLIMPORT Normalizer CreateLogNormalizer (Real scale, Real min, Real offset)
DLLIMPORT Normalizer CreateLogRangeNormalizer (const ConstImageHandle &ih, Real minoutput, Real maxoutput)
DLLIMPORT Normalizer CreateLogRangeNormalizer (Real mininput, Real maxinput, Real minoutput, Real maxoutput)
DLLIMPORT Normalizer CreateTransmissionToODNormalizer (Real mininput, Real maxinput, Real maxOD=10.0)
Real DLLIMPORT RealSpatialCrossCorrelation (const ConstImageHandle &image1, const ConstImageHandle &image2)
Real DLLIMPORT RealSpatialCrossCorrelation (const ConstImageHandle &image1, const ConstImageHandle &image2, const img::Extent &extent)
DLLIMPORT std::ostream & operator<< (std::ostream &o, const Stat &s)

Typedef Documentation

typedef ImageStateConstModOPAlgorithm<AutoCorrelateFnc> AutoCorrelate

Definition at line 44 of file auto_correlate.hh.

typedef ImageStateConstModIPAlgorithm<ClearFnc> Clear

Definition at line 47 of file clear.hh.

typedef ImageStateConstModIPAlgorithm<ClipMinMaxFnc> ClipMinMax

Definition at line 87 of file clip_min_max.hh.

typedef ImageStateConstModIPAlgorithm<ConjFnc> Conj

Definition at line 60 of file conjugate.hh.

typedef ImageStateConstModIPAlgorithm< CosFnc > Cos

Definition at line 63 of file transcendentals.hh.

typedef ImageStateConstModIPAlgorithm<SliceFnc> DensitySlice

Definition at line 60 of file density_slice.hh.

typedef ImageStateConstModOPAlgorithm<DiscreteShrinkFnc> DiscreteShrink

Definition at line 54 of file discrete_shrink.hh.

typedef ImageStateConstModIPAlgorithm< ExpFnc > Exp

Definition at line 64 of file transcendentals.hh.

typedef ImageStateConstModOPAlgorithm<ExplicitConvoluteFnc> ExplicitConvolute

Definition at line 46 of file convolute.hh.

typedef ImageStateConstModOPAlgorithm<ExplicitCorrelateFnc> ExplicitCorrelate

Definition at line 44 of file correlate.hh.

typedef image_state::ImageStateConstModOPAlgorithm<FFTFnc> FFT

Definition at line 49 of file fft.hh.

typedef ImageStateConstModIPAlgorithm<FillFnc> Fill

Definition at line 79 of file fill.hh.

typedef ImageStateModIPAlgorithm<GaussianFilterBase> GaussianFilter

Definition at line 134 of file gaussian.hh.

typedef ImageStateModIPAlgorithm<GaussianGradientMagnitudeFilterBase> GaussianGradientMagnitudeFilter

Definition at line 79 of file gaussian_gradient_magnitude.hh.

typedef ImageStateModIPAlgorithm<GaussianLaplacianFilterBase> GaussianLaplacianFilter

Definition at line 79 of file gaussian_laplacian.hh.

typedef ImageStateNonModAlgorithm<HighestPeakSearch3DBase> HighestPeakSearch3D

Definition at line 67 of file highest_peak_search_3d.hh.

typedef ImageStateNonModAlgorithm<HistogramBase> Histogram

Definition at line 70 of file histogram.hh.

typedef image_state::ImageStateConstModOPAlgorithm<alg::LineAverageBase> LineAverage

Definition at line 54 of file line_average.hh.

typedef ImageStateConstModOPAlgorithm<LocalSigmaThresholdBase> LocalSigmaThreshold

Definition at line 52 of file local_sigma_threshold.hh.

typedef ImageStateConstModIPAlgorithm< LogFnc > Log

Definition at line 65 of file transcendentals.hh.

typedef ImageStateConstModIPAlgorithm< Log10Fnc > Log10

Definition at line 66 of file transcendentals.hh.

typedef ImageStateConstModIPAlgorithm<MaskImageBase> MaskImage

Definition at line 52 of file mask_image.hh.

typedef ImageStateConstModOPAlgorithm<MirrorFnc> Mirror

Definition at line 51 of file alg_mirror.hh.

typedef ImageStateConstModIPAlgorithm<NegateFnc> Negate

Definition at line 44 of file negate.hh.

typedef ImageStateConstModIPAlgorithm<PowFnc> Pow

Definition at line 88 of file transcendentals.hh.

typedef ImageStateConstModOPAlgorithm<PowerSpectrumFnc> PowerSpectrum

Definition at line 43 of file power_spectrum.hh.

typedef ImageStateConstModIPAlgorithm<RandomizeFnc> Randomize

Definition at line 42 of file randomize.hh.

typedef ImageStateConstModOPAlgorithm<ShiftFnc> Shift

Definition at line 73 of file alg_shift.hh.

typedef ImageStateConstModIPAlgorithm< SinFnc > Sin

Definition at line 67 of file transcendentals.hh.

typedef ImageStateModIPAlgorithm<SmoothMaskImageBase> SmoothMaskImage

Definition at line 54 of file smooth_mask_image.hh.

typedef ImageStateConstModIPAlgorithm< SqrtFnc > Sqrt

Definition at line 68 of file transcendentals.hh.

typedef ImageStateNonModAlgorithm<StatBase> Stat

Definition at line 101 of file stat.hh.

typedef ImageStateNonModAlgorithm<StatMinMaxBase> StatMinMax

Definition at line 74 of file stat_min_max.hh.

typedef ImageStateConstModIPAlgorithm< TanFnc > Tan

Definition at line 69 of file transcendentals.hh.

typedef ImageStateConstModIPAlgorithm<ThresholdFnc> Threshold

Definition at line 76 of file threshold.hh.

typedef ImageStateConstModOPAlgorithm<TransformFnc> Transform

Definition at line 75 of file alg_transform.hh.

Function Documentation

DLLIMPORT Normalizer ost::img::alg::CreateLinearNormalizer ( Real  scale,
Real  offset 
)
DLLIMPORT Normalizer ost::img::alg::CreateLinearRangeNormalizer ( Real  mininput,
Real  maxinput,
Real  minoutput,
Real  maxoutput 
)
DLLIMPORT Normalizer ost::img::alg::CreateLinearRangeNormalizer ( const ConstImageHandle &  ih,
Real  minoutput,
Real  maxoutput 
)
DLLIMPORT Normalizer ost::img::alg::CreateLogNormalizer ( Real  scale,
Real  min,
Real  offset 
)
DLLIMPORT Normalizer ost::img::alg::CreateLogRangeNormalizer ( Real  mininput,
Real  maxinput,
Real  minoutput,
Real  maxoutput 
)
DLLIMPORT Normalizer ost::img::alg::CreateLogRangeNormalizer ( const ConstImageHandle &  ih,
Real  minoutput,
Real  maxoutput 
)
DLLIMPORT Normalizer ost::img::alg::CreateNoOpNormalizer (  ) 
DLLIMPORT Normalizer ost::img::alg::CreateTransmissionToODNormalizer ( Real  mininput,
Real  maxinput,
Real  maxOD = 10.0 
)
DLLIMPORT std::ostream & operator<< ( std::ostream &  o,
const Stat &  s 
)
Real DLLIMPORT ost::img::alg::RealSpatialCrossCorrelation ( const ConstImageHandle &  image1,
const ConstImageHandle &  image2,
const img::Extent &  extent 
)

Computes cross correlation of images the cross correlation is computed only within the given extent.

Both input images must be Real Spatial and their overlap with the given extent should be the same.

Real DLLIMPORT ost::img::alg::RealSpatialCrossCorrelation ( const ConstImageHandle &  image1,
const ConstImageHandle &  image2 
)

Computes cross correlation of images Both input images must be Real Spatial their extent should be the same.

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