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heuristic.hh
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1 //------------------------------------------------------------------------------
2 // This file is part of the OpenStructure project <www.openstructure.org>
3 //
4 // Copyright (C) 2008-2011 by the OpenStructure authors
5 //
6 // This library is free software; you can redistribute it and/or modify it under
7 // the terms of the GNU Lesser General Public License as published by the Free
8 // Software Foundation; either version 3.0 of the License, or (at your option)
9 // any later version.
10 // This library is distributed in the hope that it will be useful, but WITHOUT
11 // ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS
12 // FOR A PARTICULAR PURPOSE. See the GNU Lesser General Public License for more
13 // details.
14 //
15 // You should have received a copy of the GNU Lesser General Public License
16 // along with this library; if not, write to the Free Software Foundation, Inc.,
17 // 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA
18 //------------------------------------------------------------------------------
19 #ifndef OST_CONOP_HEURISTIC_HH
20 #define OST_CONOP_HEURISTIC_HH
21 
22 #include <ost/mol/entity_handle.hh>
23 #include "minimal_compound_lib.hh"
24 #include "diag.hh"
25 #include "processor.hh"
26 
27 namespace ost { namespace conop {
28 
29 
31 
32 typedef boost::shared_ptr<HeuristicProcessor> HeuristicProcessorPtr;
33 
35 public:
37  Processor(),
38  lib_()
39  {
40  }
41  virtual ProcessorPtr Copy() const {
42  return ProcessorPtr(new HeuristicProcessor(*this));
43  }
44  HeuristicProcessor(bool bf, bool at, bool cn, bool aa, ConopAction zo):
45  Processor(bf, at, cn, aa, zo),
46  lib_()
47  {}
48 
49  virtual String ToString() const;
50 protected:
51  void ProcessUnkResidue(DiagnosticsPtr diags, mol::ResidueHandle res) const;
52  virtual void DoProcess(DiagnosticsPtr diags,
53  mol::EntityHandle ent) const;
54 private:
55  MinimalCompoundLib lib_;
56 };
57 
58 
59 }}
60 
61 #endif
62 
boost::shared_ptr< HeuristicProcessor > HeuristicProcessorPtr
Definition: heuristic.hh:30
std::string String
Definition: base.hh:54
#define DLLEXPORT_OST_CONOP
boost::shared_ptr< Processor > ProcessorPtr
Definition: processor.hh:42
Protein or molecule.
boost::shared_ptr< Diagnostics > DiagnosticsPtr
Definition: diag.hh:111
virtual ProcessorPtr Copy() const
Definition: heuristic.hh:41
HeuristicProcessor(bool bf, bool at, bool cn, bool aa, ConopAction zo)
Definition: heuristic.hh:44