Static Public Member Functions
static DomainsPtr	FromAln (ost::seq::AlignmentHandle aln, Real tolerance, Real radius, Real threshold, int idx_a=-1, int idx_b=-1)

static DomainsPtr	FromCOM (const SimilarityMatrix &sim, ost::seq::AlignmentHandle aln, Real tolerance, int idx_a=-1, int idx_b=-1)

static DomainsPtr	FromDistMats (const DistanceMatrix &dmat_a, const DistanceMatrix &dmat_b, Real tolerance, Real radius, Real threshold, int num_threads, bool defined_only, bool adj_map)

Detailed Description

Definition at line 34 of file domain_find.hh.

Member Function Documentation

static

static

static DomainsPtr FromDistMats	(	const DistanceMatrix &	dmat_a,
		const DistanceMatrix &	dmat_b,
		Real	tolerance,
		Real	radius,
		Real	threshold,
		int	num_threads,
		bool	defined_only,
		bool	adj_map
	)

static

ost::img::ImageHandle GetAdjMap ( ) const

inline

Definition at line 65 of file domain_find.hh.

const std::vector<int>& GetComponents ( ) const

inline

Definition at line 63 of file domain_find.hh.

const std::vector<Domain>& GetDomains ( ) const

inline

Definition at line 62 of file domain_find.hh.

Real GetFreeD ( ) const

inline

Definition at line 59 of file domain_find.hh.

Real GetFreeS ( ) const

inline

Definition at line 60 of file domain_find.hh.

size_t GetNumFreeResidues ( ) const

inline

Definition at line 57 of file domain_find.hh.

The documentation for this class was generated from the following file: