SequenceList Class Reference

#include <sequence_list.hh>

Public Types
typedef impl::SequenceListIterator < SequenceHandle, impl::SequenceImplListIterator >	Iterator
typedef Iterator	iterator

Public Member Functions
	SequenceList ()
void	AddSequence (const SequenceHandle &sequence)
bool	SequencesHaveEqualLength () const
int	GetCount () const
SequenceHandle	operator[] (int index) const
Iterator	Begin () const
Iterator	End () const
SequenceList	Take (int n) const
SequenceList	Slice (int first, int n) const
Iterator	begin () const
Iterator	end () const
bool	IsValid () const
int	GetMinLength () const
int	GetMaxLength () const
SequenceHandle	FindSequence (const String &name) const
impl::SequenceListImplPtr &	Impl () const
	SequenceList (const impl::SequenceListImplPtr &impl)
	operator ConstSequenceList () const

Protected Member Functions
void	CheckValidity () const

Protected Attributes
impl::SequenceListImplPtr	impl_

Detailed Description

list of sequences.

The sequence list is reference counted and thus very cheap to pass around.

Definition at line 80 of file sequence_list.hh.

Member Typedef Documentation

typedef impl::SequenceListIterator<SequenceHandle, impl::SequenceImplListIterator> Iterator

Definition at line 84 of file sequence_list.hh.

typedef Iterator iterator

Definition at line 85 of file sequence_list.hh.

Constructor & Destructor Documentation

SequenceList

(

)

SequenceList

(

const impl::SequenceListImplPtr &

impl

)

Member Function Documentation

void AddSequence

(

const SequenceHandle &

sequence

)

Iterator Begin

(

)

const

Iterator begin ( ) const

inline

Definition at line 104 of file sequence_list.hh.

void CheckValidity ( ) const

protected

Iterator End

(

)

const

Iterator end ( ) const

inline

Definition at line 105 of file sequence_list.hh.

SequenceHandle FindSequence

(

const String &

name

)

const

int GetCount

(

)

const

int GetMaxLength

(

)

const

int GetMinLength

(

)

const

impl::SequenceListImplPtr& Impl

(

)

const

bool IsValid

(

)

const

operator ConstSequenceList

(

)

const

SequenceHandle operator[]

(

int

index

)

const

bool SequencesHaveEqualLength

(

)

const

SequenceList Slice	(	int	first,
		int	n
	)		const

create a sequence list from the given splice interval

SequenceList Take

(

int

n

)

const

create a sequence list consisting of n first sequences

if n is negative, the sequences taken from the end of the list

Field Documentation

impl::SequenceListImplPtr impl_

mutableprotected

Definition at line 121 of file sequence_list.hh.

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The documentation for this class was generated from the following file:

• build-2.6/stage/include/ost/seq/sequence_list.hh