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Variables
ost.seq.alg.mat Namespace Reference

Variables

tuple BLOSUM45 = _InitMatrix(SubstWeightMatrix.Preset.BLOSUM45)
 
tuple BLOSUM62 = _InitMatrix(SubstWeightMatrix.Preset.BLOSUM62)
 
tuple BLOSUM80 = _InitMatrix(SubstWeightMatrix.Preset.BLOSUM80)
 
tuple BLOSUM100 = _InitMatrix(SubstWeightMatrix.Preset.BLOSUM100)
 
tuple IDENTITY = _InitMatrix(SubstWeightMatrix.Preset.IDENTITY)
 
tuple MATCH = _InitMatrix(SubstWeightMatrix.Preset.MATCH)
 
tuple NUC44 = _InitMatrix(SubstWeightMatrix.Preset.NUC44)
 
list __all__
 

Variable Documentation

list __all__
Initial value:
1 = ['BLOSUM45','BLOSUM62','BLOSUM80','BLOSUM100', 'IDENTITY', 'MATCH',
2  'NUC44']

Definition at line 16 of file mat.py.

tuple BLOSUM100 = _InitMatrix(SubstWeightMatrix.Preset.BLOSUM100)

Definition at line 11 of file mat.py.

tuple BLOSUM45 = _InitMatrix(SubstWeightMatrix.Preset.BLOSUM45)

Definition at line 8 of file mat.py.

tuple BLOSUM62 = _InitMatrix(SubstWeightMatrix.Preset.BLOSUM62)

Definition at line 9 of file mat.py.

tuple BLOSUM80 = _InitMatrix(SubstWeightMatrix.Preset.BLOSUM80)

Definition at line 10 of file mat.py.

tuple IDENTITY = _InitMatrix(SubstWeightMatrix.Preset.IDENTITY)

Definition at line 12 of file mat.py.

tuple MATCH = _InitMatrix(SubstWeightMatrix.Preset.MATCH)

Definition at line 13 of file mat.py.

tuple NUC44 = _InitMatrix(SubstWeightMatrix.Preset.NUC44)

Definition at line 14 of file mat.py.