OpenStructure
Main Page
Related Pages
Modules
Namespaces
Data Structures
Files
Examples
File List
Globals
All
Data Structures
Namespaces
Files
Functions
Variables
Typedefs
Enumerations
Enumerator
Properties
Friends
Macros
Groups
Pages
build-2.6
stage
include
ost
mol
chain_type.hh
Go to the documentation of this file.
1
//------------------------------------------------------------------------------
2
// This file is part of the OpenStructure project <www.openstructure.org>
3
//
4
// Copyright (C) 2008-2020 by the OpenStructure authors
5
//
6
// This library is free software; you can redistribute it and/or modify it under
7
// the terms of the GNU Lesser General Public License as published by the Free
8
// Software Foundation; either version 3.0 of the License, or (at your option)
9
// any later version.
10
// This library is distributed in the hope that it will be useful, but WITHOUT
11
// ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS
12
// FOR A PARTICULAR PURPOSE. See the GNU Lesser General Public License for more
13
// details.
14
//
15
// You should have received a copy of the GNU Lesser General Public License
16
// along with this library; if not, write to the Free Software Foundation, Inc.,
17
// 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA
18
//------------------------------------------------------------------------------
19
#ifndef OST_CHAIN_TYPE_HH
20
#define OST_CHAIN_TYPE_HH
21
22
#include <
ost/mol/module_config.hh
>
23
#include <
ost/base.hh
>
24
#include <
ost/string_ref.hh
>
25
26
#include "
module_config.hh
"
27
28
namespace
ost {
namespace
mol {
29
31
typedef
enum
{
32
CHAINTYPE_POLY
,
33
CHAINTYPE_NON_POLY
,
34
CHAINTYPE_WATER
,
35
CHAINTYPE_POLY_PEPTIDE_D
,
36
CHAINTYPE_POLY_PEPTIDE_L
,
37
CHAINTYPE_POLY_DN
,
38
CHAINTYPE_POLY_RN
,
39
CHAINTYPE_POLY_SAC_D
,
40
CHAINTYPE_POLY_SAC_L
,
41
CHAINTYPE_POLY_DN_RN
,
42
CHAINTYPE_UNKNOWN
,
43
// new chain types
44
CHAINTYPE_MACROLIDE
,
45
CHAINTYPE_CYCLIC_PSEUDO_PEPTIDE
,
46
CHAINTYPE_POLY_PEPTIDE_DN_RN
,
47
CHAINTYPE_BRANCHED
,
48
CHAINTYPE_OLIGOSACCHARIDE
,
49
CHAINTYPE_N_CHAINTYPES
50
}
ChainType
;
51
58
ChainType
DLLEXPORT_OST_MOL
ChainTypeFromString
(
const
StringRef
identifier);
59
66
ChainType
DLLEXPORT_OST_MOL
ChainTypeFromString
(
const
String
& identifier);
67
74
String
DLLEXPORT_OST_MOL
StringFromChainType
(
ChainType
type);
75
76
}}
//ns
77
78
#endif
ost::StringRef
convenient datatype for referencing character data
Definition:
string_ref.hh:39
string_ref.hh
ost::mol::ChainTypeFromString
ChainType DLLIMPORT ChainTypeFromString(const StringRef identifier)
Create a ChainType item for a given string.
ost::mol::ChainType
ChainType
Definition:
chain_type.hh:31
String
std::string String
Definition:
base.hh:54
ost::mol::CHAINTYPE_OLIGOSACCHARIDE
oligosaccharide (branched carbohydrate)
Definition:
chain_type.hh:48
ost::mol::CHAINTYPE_POLY_SAC_L
polysaccharide(L)
Definition:
chain_type.hh:40
ost::mol::StringFromChainType
String DLLIMPORT StringFromChainType(ChainType type)
Return the String identifier for a given type.
ost::mol::CHAINTYPE_CYCLIC_PSEUDO_PEPTIDE
cyclic-pseudo-peptide
Definition:
chain_type.hh:45
ost::mol::CHAINTYPE_UNKNOWN
guess what
Definition:
chain_type.hh:42
module_config.hh
ost::mol::CHAINTYPE_POLY_PEPTIDE_D
(D) amino acid sequence
Definition:
chain_type.hh:35
ost::mol::CHAINTYPE_POLY
polymer
Definition:
chain_type.hh:32
ost::mol::CHAINTYPE_MACROLIDE
macrolide
Definition:
chain_type.hh:44
ost::mol::CHAINTYPE_POLY_DN
polydeoxyribonucleotide
Definition:
chain_type.hh:37
DLLEXPORT_OST_MOL
#define DLLEXPORT_OST_MOL
Definition:
module_config.hh:28
ost::mol::CHAINTYPE_N_CHAINTYPES
no. of chain types
Definition:
chain_type.hh:49
ost::mol::CHAINTYPE_POLY_RN
polyribonucleotide
Definition:
chain_type.hh:38
ost::mol::CHAINTYPE_WATER
water
Definition:
chain_type.hh:34
ost::mol::CHAINTYPE_POLY_SAC_D
polysaccharide(D)
Definition:
chain_type.hh:39
ost::mol::CHAINTYPE_POLY_PEPTIDE_DN_RN
peptide nucleic acid
Definition:
chain_type.hh:46
ost::mol::CHAINTYPE_NON_POLY
non-polymer
Definition:
chain_type.hh:33
ost::mol::CHAINTYPE_POLY_DN_RN
polydeoxyribonucleotide/ -ribonucleotide hybrid
Definition:
chain_type.hh:41
ost::mol::CHAINTYPE_POLY_PEPTIDE_L
(L) amino acid sequence
Definition:
chain_type.hh:36
base.hh
ost::mol::CHAINTYPE_BRANCHED
carbohydrate
Definition:
chain_type.hh:47
Generated by
1.8.5