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ost::bindings Namespace Reference

Namespaces

 blast
 
 cadscore
 
 clustalw
 
 dockq
 
 dssp
 
 hbplus
 
 hhblits
 
 hhblits2
 
 hhblits3
 
 ialign
 
 kclust
 
 lga
 
 mmseqs2
 
 msms
 
 naccess
 
 tmtools
 
 utils
 

Data Structures

struct  TMAlignResult
 
struct  MMAlignResult
 

Functions

TMAlignResult WrappedTMAlign (const geom::Vec3List &pos_one, const geom::Vec3List &pos_two, const ost::seq::SequenceHandle &seq1, const ost::seq::SequenceHandle &seq2, bool fast=false, bool rna=false)
 
MMAlignResult WrappedMMAlign (const std::vector< geom::Vec3List > &pos_one, const std::vector< geom::Vec3List > &pos_two, const ost::seq::SequenceList &seq1, const ost::seq::SequenceList &seq2, const std::vector< bool > &rna1, const std::vector< bool > &rna2, bool fast=false, const std::map< int, int > &mapping=std::map< int, int >())
 
TMAlignResult WrappedTMAlign (const ost::mol::ChainView &ent1, const ost::mol::ChainView &ent2, bool fast=false)
 
MMAlignResult WrappedMMAlign (const ost::mol::EntityView &ent1, const ost::mol::EntityView &ent2, bool fast=false, const std::map< String, String > &mapping=std::map< String, String >())
 

Function Documentation

MMAlignResult ost::bindings::WrappedMMAlign ( const std::vector< geom::Vec3List > &  pos_one,
const std::vector< geom::Vec3List > &  pos_two,
const ost::seq::SequenceList seq1,
const ost::seq::SequenceList seq2,
const std::vector< bool > &  rna1,
const std::vector< bool > &  rna2,
bool  fast = false,
const std::map< int, int > &  mapping = std::map< int, int >() 
)
MMAlignResult ost::bindings::WrappedMMAlign ( const ost::mol::EntityView ent1,
const ost::mol::EntityView ent2,
bool  fast = false,
const std::map< String, String > &  mapping = std::map< StringString >() 
)
TMAlignResult ost::bindings::WrappedTMAlign ( const geom::Vec3List pos_one,
const geom::Vec3List pos_two,
const ost::seq::SequenceHandle seq1,
const ost::seq::SequenceHandle seq2,
bool  fast = false,
bool  rna = false 
)
TMAlignResult ost::bindings::WrappedTMAlign ( const ost::mol::ChainView ent1,
const ost::mol::ChainView ent2,
bool  fast = false 
)