ost::bindings Namespace Reference

Namespaces
	blast
	cadscore
	clustalw
	dockq
	dssp
	hbplus
	hhblits
	hhblits2
	hhblits3
	ialign
	kclust
	lga
	mmseqs2
	msms
	naccess
	tmtools
	utils

Data Structures
struct	TMAlignResult
struct	MMAlignResult

Functions
TMAlignResult	WrappedTMAlign (const geom::Vec3List &pos_one, const geom::Vec3List &pos_two, const ost::seq::SequenceHandle &seq1, const ost::seq::SequenceHandle &seq2, bool fast=false, bool rna=false)
MMAlignResult	WrappedMMAlign (const std::vector< geom::Vec3List > &pos_one, const std::vector< geom::Vec3List > &pos_two, const ost::seq::SequenceList &seq1, const ost::seq::SequenceList &seq2, const std::vector< bool > &rna1, const std::vector< bool > &rna2, bool fast=false, const std::map< int, int > &mapping=std::map< int, int >())
TMAlignResult	WrappedTMAlign (const ost::mol::ChainView &ent1, const ost::mol::ChainView &ent2, bool fast=false)
MMAlignResult	WrappedMMAlign (const ost::mol::EntityView &ent1, const ost::mol::EntityView &ent2, bool fast=false, const std::map< String, String > &mapping=std::map< String, String >())

Function Documentation

MMAlignResult ost::bindings::WrappedMMAlign	(	const std::vector< geom::Vec3List > &	pos_one,
		const std::vector< geom::Vec3List > &	pos_two,
		const ost::seq::SequenceList &	seq1,
		const ost::seq::SequenceList &	seq2,
		const std::vector< bool > &	rna1,
		const std::vector< bool > &	rna2,
		bool	fast = false,
		const std::map< int, int > &	mapping = std::map< int, int >()
	)

MMAlignResult ost::bindings::WrappedMMAlign	(	const ost::mol::EntityView &	ent1,
		const ost::mol::EntityView &	ent2,
		bool	fast = false,
		const std::map< String, String > &	mapping = std::map< String, String >()
	)

TMAlignResult ost::bindings::WrappedTMAlign	(	const geom::Vec3List &	pos_one,
		const geom::Vec3List &	pos_two,
		const ost::seq::SequenceHandle &	seq1,
		const ost::seq::SequenceHandle &	seq2,
		bool	fast = false,
		bool	rna = false
	)

TMAlignResult ost::bindings::WrappedTMAlign	(	const ost::mol::ChainView &	ent1,
		const ost::mol::ChainView &	ent2,
		bool	fast = false
	)