OpenStructure
Public Member Functions | Data Fields
MMAlignResult Struct Reference

#include <wrap_tmalign.hh>

Public Member Functions

 MMAlignResult ()
 
 MMAlignResult (Real rm, Real tm, Real tm_swp, int al, const geom::Mat4 &t, const ost::seq::AlignmentList &alns, const std::vector< String > &e1c, const std::vector< String > &e2c)
 
Real GetTMScore ()
 
Real GetTMScoreSwapped ()
 
Real GetRMSD ()
 
int GetAlignedLength ()
 
const geom::Mat4 & GetTransform ()
 
const ost::seq::AlignmentList & GetAlignments ()
 
const std::vector< String > & GetEnt1MappedChains ()
 
const std::vector< String > & GetEnt2MappedChains ()
 

Data Fields

Real rmsd
 
Real tm_score
 
Real tm_score_swapped
 
int aligned_length
 
geom::Mat4 transform
 
ost::seq::AlignmentList alignments
 
std::vector< String > ent1_mapped_chains
 
std::vector< String > ent2_mapped_chains
 

Detailed Description

Definition at line 58 of file wrap_tmalign.hh.

Constructor & Destructor Documentation

◆ MMAlignResult() [1/2]

MMAlignResult ( )
inline

Definition at line 60 of file wrap_tmalign.hh.

◆ MMAlignResult() [2/2]

MMAlignResult ( Real  rm,
Real  tm,
Real  tm_swp,
int  al,
const geom::Mat4 &  t,
const ost::seq::AlignmentList &  alns,
const std::vector< String > &  e1c,
const std::vector< String > &  e2c 
)
inline

Definition at line 62 of file wrap_tmalign.hh.

Member Function Documentation

◆ GetAlignedLength()

int GetAlignedLength ( )
inline

Definition at line 87 of file wrap_tmalign.hh.

◆ GetAlignments()

const ost::seq::AlignmentList& GetAlignments ( )
inline

Definition at line 89 of file wrap_tmalign.hh.

◆ GetEnt1MappedChains()

const std::vector<String>& GetEnt1MappedChains ( )
inline

Definition at line 90 of file wrap_tmalign.hh.

◆ GetEnt2MappedChains()

const std::vector<String>& GetEnt2MappedChains ( )
inline

Definition at line 91 of file wrap_tmalign.hh.

◆ GetRMSD()

Real GetRMSD ( )
inline

Definition at line 86 of file wrap_tmalign.hh.

◆ GetTMScore()

Real GetTMScore ( )
inline

Definition at line 84 of file wrap_tmalign.hh.

◆ GetTMScoreSwapped()

Real GetTMScoreSwapped ( )
inline

Definition at line 85 of file wrap_tmalign.hh.

◆ GetTransform()

const geom::Mat4& GetTransform ( )
inline

Definition at line 88 of file wrap_tmalign.hh.

Field Documentation

◆ aligned_length

int aligned_length

Definition at line 78 of file wrap_tmalign.hh.

◆ alignments

ost::seq::AlignmentList alignments

Definition at line 80 of file wrap_tmalign.hh.

◆ ent1_mapped_chains

std::vector<String> ent1_mapped_chains

Definition at line 81 of file wrap_tmalign.hh.

◆ ent2_mapped_chains

std::vector<String> ent2_mapped_chains

Definition at line 82 of file wrap_tmalign.hh.

◆ rmsd

Real rmsd

Definition at line 75 of file wrap_tmalign.hh.

◆ tm_score

Real tm_score

Definition at line 76 of file wrap_tmalign.hh.

◆ tm_score_swapped

Real tm_score_swapped

Definition at line 77 of file wrap_tmalign.hh.

◆ transform

geom::Mat4 transform

Definition at line 79 of file wrap_tmalign.hh.

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