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dcd_io.hh
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1//------------------------------------------------------------------------------
2// This file is part of the OpenStructure project <www.openstructure.org>
3//
4// Copyright (C) 2008-2020 by the OpenStructure authors
5//
6// This library is free software; you can redistribute it and/or modify it under
7// the terms of the GNU Lesser General Public License as published by the Free
8// Software Foundation; either version 3.0 of the License, or (at your option)
9// any later version.
10// This library is distributed in the hope that it will be useful, but WITHOUT
11// ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS
12// FOR A PARTICULAR PURPOSE. See the GNU Lesser General Public License for more
13// details.
14//
15// You should have received a copy of the GNU Lesser General Public License
16// along with this library; if not, write to the Free Software Foundation, Inc.,
17// 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA
18//------------------------------------------------------------------------------
19#ifndef OST_IO_ENTITY_DCD_IO_HH
20#define OST_IO_ENTITY_DCD_IO_HH
21
22/*
23 CHARMM trajectory IO
24 Authors: Ansgar Philippsen, Marco Biasini
25 */
26
30namespace ost { namespace io {
31
32
33
39 const String& trj_filename,
40 unsigned int stride=1,
41 bool lazy_load=false,
42 bool detect_swap=true,
43 bool byte_swap=false);
44
45
51 const String& pdb_filename,
52 const String& dcd_filename,
53 unsigned int stride=1,
54 const IOProfile& profile=IOProfile());
55
56
57}} // ns
58
59#endif
coordinate group, for trajectories and such
Protein or molecule.
#define DLLEXPORT_OST_IO
std::string String
Definition base.hh:54
void DLLEXPORT_OST_IO SaveCHARMMTraj(const mol::CoordGroupHandle &coord_group, const String &pdb_filename, const String &dcd_filename, unsigned int stride=1, const IOProfile &profile=IOProfile())
export coord group as PDB file and DCD trajectory if the pdb filename is an empty string,...
mol::CoordGroupHandle DLLEXPORT_OST_IO LoadCHARMMTraj(const mol::EntityHandle &ent, const String &trj_filename, unsigned int stride=1, bool lazy_load=false, bool detect_swap=true, bool byte_swap=false)
import a CHARMM trajectory in dcd format with an existing entity requires the existing entity and the...
Definition base.dox:1