distance_map.hh File Reference

#include <numeric>
#include <cmath>
#include <algorithm>
#include <ost/tri_matrix.hh>
#include <ost/integrity_error.hh>
#include <ost/seq/alignment_handle.hh>
#include <ost/seq/alg/module_config.hh>

Go to the source code of this file.

Data Structures
struct	Distances
class	DistanceMap

Namespaces
namespace	ost
namespace	ost::seq
namespace	ost::seq::alg

Typedefs
typedef boost::shared_ptr< DistanceMap >	DistanceMapPtr

Functions
DistanceMapPtr DLLEXPORT_OST_SEQ_ALG	CreateDistanceMap (const seq::AlignmentHandle &alignment)