mat.py

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from ost.seq.alg import SubstWeightMatrix
 
def _InitMatrix(preset_enum):
  mat = SubstWeightMatrix()
  mat.AssignPreset(preset_enum)
  return mat
 
BLOSUM45 = _InitMatrix(SubstWeightMatrix.Preset.BLOSUM45)
BLOSUM62 = _InitMatrix(SubstWeightMatrix.Preset.BLOSUM62)
BLOSUM80 = _InitMatrix(SubstWeightMatrix.Preset.BLOSUM80)
BLOSUM100 = _InitMatrix(SubstWeightMatrix.Preset.BLOSUM100)
NUC44 = _InitMatrix(SubstWeightMatrix.Preset.NUC44)
 
__all__=['BLOSUM45','BLOSUM62','BLOSUM80','BLOSUM100','NUC44']