|
| Dist2Mean (ost::seq::alg) | ImageStateNonModAlgorithm (ost::img::image_state) | Nanoscope (ost::io) | SequenceIOHandlerFactoryBase (ost::io) |
| DistanceMap (ost::seq::alg) | ImageStateNonModVisitor (ost::img::image_state) | Node (ost::mol::impl) | SequenceList (ost::seq) |
| AdjacencyBitmap (ost::mol::alg) | DistanceMatrix (ost::mol::alg) | ImageStateNonModVisitorBase (ost::img::image_state) | NonModAlgorithm (ost::img) | SequenceListImpl (ost::seq::impl) |
| AlgorithmBase (ost::img) | Distances (ost::seq::alg) | Index (ost::mol::mm) | NoOpNormalizer (ost::img) | SequenceListIterator (ost::seq::impl) |
| AlignedColumn (ost::seq) | divide_dimensions (ost::img::physics::detail) | Index (ost::img::image_state) | NormalizeFnc (ost::img) | SerializeHelper (ost::io::detail) |
| AlignedColumnIterator (ost::seq) | DivideByZeroException (geom) | Index< 1 > (ost::mol::mm) | Normalizer (ost::img::alg) | SerializeHelper< false, T > (ost::io::detail) |
| AlignedCuboid (geom) | DM3 (ost::io) | Index< 2 > (ost::mol::mm) | NormalizerImpl (ost::img) | SerializeHelper< true, T > (ost::io::detail) |
| AlignedPatch (ost.bindings.blast) | Domain (ost::mol::alg) | Index< 3 > (ost::mol::mm) | NotConnectedError (ost::mol) | SerializeWriteHelper (ost::io::detail) |
| AlignedRegion (ost::seq) | Domains (ost::mol::alg) | Index< 4 > (ost::mol::mm) | NullData (ost::img) | SerializeWriteHelper< false, T > (ost::io::detail) |
| AlignmentHandle (ost::seq) | DSSPAccessibilityParam (ost::mol::alg) | Index< 5 > (ost::mol::mm) | XMLTestRunnerTest.NullStream (ost.xmlrunner) | SerializeWriteHelper< true, T > (ost::io::detail) |
| AlignmentOpts (ost::seq::alg) | DX (ost::io) | Index< 6 > (ost::mol::mm) |
| Settings (ost::mol::mm) |
| AminoAcidSet (ost::conop) |
| Index< 7 > (ost::mol::mm) | ShiftFnc (ost::img::alg) |
| AminoAcidSetIterator (ost::conop) | IndexBase (ost::mol::mm::impl) | Observable (ost::img) | SimilarityMatrix (ost::mol::alg) |
| AndOp (ost::img) | EditorBase (ost::mol) | IndexIterator (ost::mol::mm) | Observer (ost::mol::mm) | Simulation (ost::mol::mm) |
| AnisotropicFilter (ost::img::alg) | Ellipse2 (geom) | IndexIterator (ost::img::image_state) | OligoLDDTScorer (ost.mol.alg.qsscoring) | SinFnc (ost::img::alg) |
| AssemblyInfo (ost::db) | EllipticPolar (ost::img::alg) | InMemCoordSource (ost::mol) | OpBase (ost::img) | Situs (ost::io) |
| AtomBase (ost::mol) | EntityBase (ost::mol) | InsDel (ost::seq::alg) | OrOp (ost::img) | Size (ost::img) |
| AtomGroup (ost::mol::impl) | EntityHandle (ost::mol) | IntegrityError (ost) | OstOptionParser (ost.ost_startup) | SliceFnc (ost::img::alg) |
| AtomGroupEntry (ost::mol::impl) | EntityImpl (ost::mol::impl) | Interaction (ost::mol::mm) | OutOfRangeException (geom) | SmoothMaskImageBase (ost::img::alg) |
| AtomHandle (ost::mol) | EntityIOCRDHandler (ost::io) | InvalidAlignment (ost::seq) | OverlapResult (ost::mol::alg) | SpatialDomain (ost::img::image_state) |
| AtomImpl (ost::mol::impl) | EntityIOHandler (ost::io) | InvalidatedPointer |
| SpatialOrganizer (ost::mol) |
| AtomProp (ost::mol::impl) | EntityIOHandlerFactory (ost::io) | InvalidExtentException (ost::img) | Sphere (geom) |
| AtomSpec (ost::conop) | EntityIOHandlerFactoryBase (ost::io) | InvalidHandle (ost) | PagedArray (ost::db) | SphericalMask (ost::img) |
| AtomView (ost::mol) | EntityIOMAEHandler (ost::io) | InvalidImageHandle (ost::img) | PairSubstWeightMatrix (ost::seq::alg) | Spider (ost::io) |
| AutoCorrelateFnc (ost::img::alg) | EntityIOMMCIFHandler (ost::io) | InvalidImageStateVisitor (ost::img::image_state) | PairToTupleConverter (ost) | SqrtFnc (ost::img::alg) |
|
| EntityIOPDBHandler (ost::io) | InvalidObserver (ost::img) | PasteFnc (ost::img::detail) | StarDataItem (ost::io) |
| EntityIOPQRHandler (ost::io) | InvalidSampling (ost::img) | PDBize (ost::mol::alg) | StarLoopDesc (ost::io) |
| binary_dispatch_ip (ost::img::image_state::dispatch) | EntityIOSDFHandler (ost::io) | InvalidSequence (ost::seq) | PDBReader (ost::io) | StarParser (ost::io) |
| binary_dispatch_op (ost::img::image_state::dispatch) | EntityObserver (ost::mol) | InvertedMask (ost::img) | PDBWriter (ost::io) | StatAccumulator (ost::img::alg) |
| BinaryColExpr (ost.table) | EntityPropertyMapper (ost::mol) | IOException (ost::io) | Peak (ost::img) | StatBase (ost::img::alg) |
| BinaryDataSink (ost::io) | EntityView (ost::mol) | IOFileAlreadyLoadedException (ost::io) | Phase (ost::img) | StateExtractor (ost::mol::mm) |
| BinaryDataSource (ost::io) | EntityViewVisitor (ost::mol) | IOManager (ost::io) | PirIOHandler (ost::io) | StatMinMaxBase (ost::img::alg) |
| BinaryIStream (ost::io) | EntityVisitor (ost::mol) | IOProfile (ost::io) | RasterImage::Pixel (ost::img) | Steep (ost::mol::mm) |
| BinaryOStream (ost::io) | Error (ost) | IOProfileRegistry (ost::io) | PixelSampling (ost::img) | StereoChemicalAngleViolation (ost::mol::alg) |
| BlastError (ost.bindings.blast) | ExpFnc (ost::img::alg) | IOProfiles (ost.io) | Plane (geom) | StereoChemicalBondViolation (ost::mol::alg) |
| BlastHit (ost.bindings.blast) | ExplicitConvoluteFnc (ost::img::alg) | IOUnknownFormatException (ost::io) | PNG (ost::io) | StereoChemicalParams (ost::mol::alg) |
| BlockModifier (ost::mol::mm) | ExplicitCorrelateFnc (ost::img::alg) | IPL (ost::io) | PodVector (ost) | StereoChemicalProps (ost::mol::alg) |
| BondHandle (ost::mol) | Extent (ost::img) |
| Point (ost::img) | StereoChemistryInfo (ost::mol::alg) |
| BondLengthInfo (ost::mol::alg) | ExtentIterator (ost::img) | PointCloud (geom) | StreamLogSink (ost) |
| BondSpec (ost::conop) | ExtentMask (ost::img) | JPK (ost::io) | PointCloudManager (geom) | StringLogSink (ost) |
| BondTable (ost::mol) |
|
| pointer_it (ost::mol::impl) | StringOrRegexParam (ost::mol::impl) |
| BondTableEntry (ost::mol) | PointList (ost::img) | StringRef (ost) |
| Builder (ost::mol) | FastaIOHandler (ost::io) | lDDTLocalScore (ost::mol::alg) | Polar (ost::img::alg) | SubstWeightMatrix (ost::seq::alg) |
| BuildingBlock (ost::mol::mm) | FermiHighPassFilter (ost::img::alg) | lDDTScorer (ost::mol::alg) | Polygon2 (geom) | SuperpositionResult (ost::mol::alg) |
| ButterworthHighPassFilter (ost::img::alg) | FermiLowPassFilter (ost::img::alg) | lDDTSettings (ost::mol::alg) | PolygonMask (ost::img) | SurfaceHandle (ost::mol) |
| ButterworthLowPassFilter (ost::img::alg) | FFReader (ost::mol::mm) | LDT (ost::mol::alg) | PowerSpectrumFnc (ost::img::alg) | SurfaceImpl (ost::mol::impl) |
|
| FFTException (ost::img::alg) | Line2 (geom) | PowFnc (ost::img::alg) | SurfaceIOHandler (ost::io) |
| FFTFnc (ost::img::alg) | Line3 (geom) | PQRReader (ost::io) | SurfaceIOHandlerFactory (ost::io) |
| CADResult (ost.bindings.cadscore) | FileLogSink (ost) | LinearCharacterContainer (ost::db) | PQRWriter (ost::io) | SurfaceIOHandlerFactoryBase (ost::io) |
| CalcDensityForceKernel (ost::mol::mm) | FileNotFound (ost.settings) | LinearIndexer (ost::db) | PreparedStatement (ost::db) | SurfaceIOMSMSHandler (ost::io) |
| Cartesian (ost::img::alg) | FindMemParam (ost::mol::alg) | LinearNormalizer (ost::img::alg) | Processor (ost::conop) | SurfaceTri (ost::mol) |
| CCP4 (ost::io) | FixedString (ost) | LinearPositionContainer (ost::db) | Profile (ost) | SurfaceVertex (ost::mol) |
| ChainBase (ost::mol) | Forcefield (ost::mol::mm) | LinearRangeNormalizer (ost::img::alg) | ProfileColumn (ost::seq) | SystemCreator (ost::mol::mm) |
| ChainHandle (ost::mol) | FormattedLine (ost::io) | LineAverageBase (ost::img::alg) | ProfileDB (ost::seq) |
|
| ChainImpl (ost::mol::impl) | FractionalShift (ost::img::alg) | LineIterator (ost::img::alg) | ProfileHandle (ost::seq) |
| ChainView (ost::mol) | FragmentImpl (ost::mol::impl) | LineSlice (ost::io) | ProfileIOHandler (ost::io) | Table (ost.table) |
| CHARMMData (ost::mol::mm) | FrequencyDomain (ost::img::image_state) | LocalSigmaThresholdBase (ost::img::alg) | ProfileIOHandlerFactory (ost::io) | TableCol (ost.table) |
| Checker (ost::conop) |
| Log10Fnc (ost::img::alg) | ProfileIOHandlerFactoryBase (ost::io) | TableRow (ost.table) |
| ChemClass (ost::mol) | LogFnc (ost::img::alg) | Progress (ost::img) | TableSelector (ost.table_selector) |
| ChemdictParser (ost::io) | GaussianFilterBase (ost::img::alg) | Logger (ost) | PromodIOHandler (ost::io) | TanFnc (ost::img::alg) |
| ChemType (ost::mol) | GaussianGradientMagnitudeFilterBase (ost::img::alg) | LogicOPNode (ost::mol::impl) | Prop (ost::mol) | TempDirWithFiles (ost.bindings.utils) |
| Circle2 (geom) | GaussianHighPassFilter (ost::img::alg) | LogNormalizer (ost::img::alg) | PropertyError (ost::mol) | TerminiConstructor (ost::mol::mm) |
| CircleMask (ost::img) | GaussianLaplacianFilterBase (ost::img::alg) | LogRangeNormalizer (ost::img::alg) | PssmIOHandler (ost::io) | TerminiExceptions (ost::mol::mm) |
| circular_iter | GaussianLowPassFilter (ost::img::alg) | LogSink (ost) | PtrObserver | TIF (ost::io) |
| ClashEvent (ost::mol::alg) | GDTResult (ost.bindings.lga) | LowPassFilter (ost::img::alg) |
| tiff_warning_handler_wrapper (ost::io::detail) |
| ClashingDistances (ost::mol::alg) | GenericPropContainer (ost) | LPadded (ost::io::fmt) | TMAlignResult (ost::bindings) |
| ClashingInfo (ost::mol::alg) | GenericPropContainerImpl (ost) | LPaddedFloat (ost::io::fmt) | QSscoreEntity (ost.mol.alg.qsscoring) | TMScoreResult (ost.bindings.tmtools) |
| ClustalIOHandler (ost::io) | GenericPropError (ost) | LPaddedInt (ost::io::fmt) | QSscoreError (ost.mol.alg.qsscoring) | Topology (ost::mol::mm) |
| cluster (ost.bindings.kclust) | GenProp (ost::mol::impl) |
| QSscorer (ost.mol.alg.qsscoring) | TopologyCreator (ost::mol::mm) |
| complexint16 (ost::io::detail) | GeomException (geom) | quantity (ost::img::physics::detail) | TorsionHandle (ost::mol) |
| complexint32 (ost::io::detail) | GromacsBlockModifier (ost::mol::mm) | MAEReader (ost::io) | Quat (geom) | TorsionImpl (ost::mol::impl) |
| complexint8 (ost::io::detail) | GromacsData (ost::mol::mm) | MapIODatHandler (ost::io) | Query (ost::mol) | TrajObserver (ost::mol::mm) |
| CompositeMask (ost::img) | GromacsHydrogenConstructor (ost::mol::mm) | MapIODm3Handler (ost::io) | QueryError (ost::mol) | TrajWriter (ost::mol::mm) |
| Compound (ost::conop) | GromacsPositionRuleEvaluator (ost::mol::mm) | MapIODxHandler (ost::io) | QueryErrorDesc (ost::mol) | Transform (geom) |
| CompoundLib (ost::conop) |
| MapIOHandler (ost::io) | QueryFlag (ost::mol) | Transformation (ost::img::alg) |
| CompoundLibBase (ost::conop) | MapIOHandlerFactory (ost::io) | QueryImpl (ost::mol::impl) | TransformFnc (ost::img::alg) |
| ConjFnc (ost::img::alg) | HalfFrequencyDomain (ost::img::image_state) | MapIOHandlerFactoryBase (ost::io) | QueryLexer (ost::mol::impl) | Translate (ost::img::alg) |
| ConnectorImpl (ost::mol::impl) | HBond (ost.mol.alg.hbond) | MapIOIPLHandler (ost::io) | QueryState (ost::mol) | TransmissionToODNormalizer (ost::img::alg) |
| Conopology (ost::conop) | HBond (ost.bindings.hbplus) | MapIOJpkHandler (ost::io) | QueryToken (ost::mol::impl) | TriMatrix (ost) |
| const_circular_iter | HBondableAtoms (ost.mol.alg.hbond) | MapIOMrcHandler (ost::io) | QueryViewWrapper (ost::mol) | types |
| ConstData (ost::img) | HBondAcceptor (ost.mol.alg.hbond) | MapIONanoscopeHandler (ost::io) |
| types |
| ConstGenericPropContainer (ost) | HBondDonor (ost.mol.alg.hbond) | MapIOPngHandler (ost::io) |
|
| ConstImageHandle (ost::img) | HeuristicBlockModifier (ost::mol::mm) | MapIOSitusHandler (ost::io) | RandomizeFnc (ost::img::alg) |
| ConstModIPAlgorithm (ost::img) | HeuristicHydrogenConstructor (ost::mol::mm) | MapIOSpiHandler (ost::io) | Range (ost) | unary_dispatch_ip (ost::img::image_state::dispatch) |
| ConstModOPAlgorithm (ost::img) | HeuristicProcessor (ost::conop) | MapIOTiffHandler (ost::io) | RangeHandler (ost::img) | unary_dispatch_op (ost::img::image_state::dispatch) |
| ConstSequenceHandle (ost::seq) | HHblits (ost.bindings.hhblits) | MappedLDDTScorer (ost.mol.alg.qsscoring) | RasterImage (ost::img) | UndefinedImageFormat (ost::io) |
| ConstSequenceList (ost::seq) | HHblitsHeader (ost.bindings.hhblits) | MaskBase (ost::img) | Rectangle2 (geom) | UniqueAtomIdentifier (ost::mol::alg) |
| Contact (ost::mol::alg) | HHblitsHit (ost.bindings.hhblits) | MaskImageBase (ost::img::alg) | ReferenceCalcDensityForceKernel (ost::mol::mm) | Units (ost) |
| ContactPredictionScoreResult (ost::seq::alg) | HhmIOHandler (ost::io) | MaskVisitor (ost::img) | ReferenceDensityKernelFactory (ost::mol::mm) |
|
| ContactWeightMatrix (ost::seq::alg) | HighestPeakSearch3DBase (ost::img::alg) | Mat2 (geom) | RefMode (ost::seq::alg) |
| Convert (ost::io) | HighPassFilter (ost::img::alg) | Mat3 (geom) | RemoteRepository (ost.io.remote) | ValueHolder (ost::img::image_state) |
| CoordFrame (ost::mol) | HistogramBase (ost::img::alg) | Mat4 (geom) | ResidueBase (ost::mol) | VarianceMap (ost::seq::alg) |
| CoordGroupHandle (ost::mol) | HistogramError (ost::img::alg) | MeanSquareMinimizer (ost::mol::alg) | ResidueHandle (ost::mol) | Vec2 (geom) |
| CoordSource (ost::mol) | HydrogenConstructor (ost::mol::mm) | MinimalCompoundLib (ost::conop) | ResidueImpl (ost::mol::impl) | Vec3 (geom) |
| CosFnc (ost::img::alg) | Hyperbola2 (geom) | MirrorFnc (ost::img::alg) | ResidueNames (ost::mol::mm) | Vec3List (geom) |
| CRDReader (ost::io) |
| MMAlignResult (ost.bindings.tmtools) | ResidueView (ost::mol) | Vec4 (geom) |
| CRDWriter (ost::io) | MMCifInfo (ost::io) | ResNum (ost::mol) | VectorAdditions (geom) |
| CrossCorrelate (ost::img::alg) | iAlignResult (ost.bindings.ialign) | MMCifInfoBioUnit (ost::io) | RingFinder (ost::conop) | VectorToListConverter (ost) |
| Cuboid (geom) | ICSEditor (ost::mol) | MMCifInfoCitation (ost::io) | Rotate2D (ost::img::alg) | ViewAddFlag (ost::mol) |
| CuboidAxis (geom) | ImageFormatBase (ost::io) | MMCifInfoObsolete (ost::io) | Rotate2D90 (ost::img::alg) |
|
|
| ImageHandle (ost::img) | MMCifInfoRevisions (ost::io) | Rotation3 (geom) |
| ImageList (ost::img) | MMCifInfoStructDetails (ost::io) | RowSet (ost::db) | WithinParam (ost::mol::impl) |
| DAT (ost::io) | ImageStateBase (ost::img::image_state) | MMCifInfoStructRef (ost::io) | RPadded (ost::io::fmt) |
|
| Data (ost::img) | ImageStateConstModIPAlgorithm (ost::img::image_state) | MMCifInfoStructRefSeq (ost::io) | RuleBasedProcessor (ost::conop) |
| Database (ost::db) | ImageStateConstModIPVisitor (ost::img::image_state) | MMCifInfoStructRefSeqDif (ost::io) |
| XCSEditor (ost::mol) |
| DatabaseError (ost::db) | ImageStateConstModIPVisitorBase (ost::img::image_state) | MMCifInfoTransOp (ost::io) | XMLTestRunner (ost.xmlrunner) |
| DataObserver (ost::img) | ImageStateConstModOPAlgorithm (ost::img::image_state) | MMCifReader (ost::io) | Scalar (ost::img::physics) | XMLTestRunnerTest (ost.xmlrunner) |
| Date (ost::conop) | ImageStateConstModOPVisitor (ost::img::image_state) | MMPreprocessor (ost::mol::mm) | Scale (ost::img::alg) | XorOp (ost::img) |
| DensityForce (ost::mol::mm) | ImageStateConstModOPVisitorBase (ost::img::image_state) | Modeller (ost::mol::mm) | SDFReader (ost::io) |
|
| DensityForceImpl (ost::mol::mm) | ImageStateImpl (ost::img::image_state) | ModelRepository (ost.io.repository) | SDFWriter (ost::io) |
| DF3 (ost::io) | ImageStateModIPAlgorithm (ost::img::image_state) | ModIPAlgorithm (ost::img) | SecStructure (ost::mol) | _CachedRMSD (ost.mol.alg.qsscoring) |
| DF3MapIOHandler (ost::io) | ImageStateModIPVisitor (ost::img::image_state) | ModOPAlgorithm (ost::img) | SecStructureSegment (ost::mol::alg) | _fake_std_streams (ost.xmlrunner) |
| DFT (ost::img::alg) | ImageStateModIPVisitorBase (ost::img::image_state) | MolckSettings (ost::mol::alg) | SelItem (ost::mol::impl) | _TestInfo (ost.xmlrunner) |
| Diag (ost::conop) | ImageStateModOPAlgorithm (ost::img::image_state) | MRC (ost::io) | SelNode (ost::mol::impl) | _XMLTestResult (ost.xmlrunner) |
| DiagError (ost::conop) | ImageStateModOPVisitor (ost::img::image_state) | MsmsProcessError (ost.bindings.msms) | SelStmt (ost::mol::impl) | |
| Diagnostics (ost::conop) | ImageStateModOPVisitorBase (ost::img::image_state) | MultiLogSink (ost) | SequenceHandle (ost::seq) | |
| Dihedral (ost::mol::impl) | ImageStateMorphAlgorithm (ost::img::image_state) | multiply_dimensions (ost::img::physics::detail) | SequenceImpl (ost::seq::impl) | |
| DiscreteShrinkFnc (ost::img::alg) | ImageStateMorphVisitor (ost::img::image_state) |
| SequenceIOHandler (ost::io) | |
| DispatchException (ost::img::image_state) | ImageStateMorphVisitorBase (ost::img::image_state) | SequenceIOHandlerFactory (ost::io) | |
| | NACCESSAccessibilityParam (ost::mol::alg) | | |
| | | | |
1.8.5
