Public Member Functions | |
def | __init__ |
Data Fields | |
hit_id | |
aln | |
score | |
ss_score | |
evalue | |
prob | |
pvalue |
A hit found by HHblits .. attribute:: hit_id String identifying the hit :type: :class:`str` .. attribute:: aln Pairwise alignment containing the aligned part between the query and the target. First sequence is the query, the second sequence the target. :type: :class:`~ost.seq.AlignmentHandle` .. attribute:: score The alignment score :type: :class:`float` .. attribute:: ss_score The secondary structure score :type: :class:`float` .. attribute:: evalue The E-value of the alignment :type: :class:`float` .. attribute:: pvalue The P-value of the alignment :type: :class:`float` .. attribute:: prob The probability of the alignment (between 0 and 100) :type: :class:`float`
Definition at line 14 of file hhblits.py.
def __init__ | ( | self, | ||
hit_id, | ||||
aln, | ||||
score, | ||||
ss_score, | ||||
evalue, | ||||
pvalue, | ||||
prob | ||||
) |
Definition at line 61 of file hhblits.py.
Definition at line 63 of file hhblits.py.
Definition at line 66 of file hhblits.py.
Definition at line 62 of file hhblits.py.
Definition at line 67 of file hhblits.py.
Definition at line 68 of file hhblits.py.
Definition at line 64 of file hhblits.py.
Definition at line 65 of file hhblits.py.