ContactScorerResultIPS Class Reference

Public Member Functions
def	__init__
def	n_trg_int_res
def	n_mdl_int_res
def	precision
def	recall
def	ips

Detailed Description

Holds data relevant to compute ips

Definition at line 312 of file contact_score.py.

Constructor & Destructor Documentation

def __init__	(		self,
			n_trg_int_res,
			n_mdl_int_res,
			n_union,
			n_intersection
	)

Definition at line 316 of file contact_score.py.

Member Function Documentation

def ips

(

self

)

The Interface Patch Similarity score (IPS)

Jaccard coefficient of interface residues in model/target.
Technically thats :attr:`intersection`/:attr:`union` 

:type: :class:`float`

Definition at line 367 of file contact_score.py.

def n_mdl_int_res

(

self

)

Number of interface residues in model

:type: :class:`int`

Definition at line 331 of file contact_score.py.

def n_trg_int_res

(

self

)

Number of interface residues in target

:type: :class:`int`

Definition at line 323 of file contact_score.py.

def precision

(

self

)

Precision of model interface residues

The fraction of model interface residues that are also interface
residues in target

:type: :class:`int`

Definition at line 339 of file contact_score.py.

def recall

(

self

)

Recall of model interface residues

The fraction of target interface residues that are also interface
residues in model

:type: :class:`int`

Definition at line 353 of file contact_score.py.

---

The documentation for this class was generated from the following file:

• build-2.7-doc/stage/lib64/python3.6/site-packages/ost/mol/alg/contact_score.py