#include <chemdict_parser.hh>

Inherits StarParser, and StarParser.

Public Member Functions
	ChemdictParser (std::istream &stream, conop::Compound::Dialect dialect, bool ignore_reserved=false, bool ignore_obsolete=false)

virtual bool	OnBeginData (const StringRef &data_name)

virtual bool	OnBeginLoop (const StarLoopDesc &header)

virtual void	OnDataRow (const StarLoopDesc &header, const std::vector< StringRef > &columns)

virtual void	OnDataItem (const StarDataItem &item)

virtual void	OnEndData ()

void	SetCompoundLib (const conop::CompoundLibPtr &lib)

int	GetImportedCount ()

	ChemdictParser (std::istream &stream, conop::Compound::Dialect dialect, bool ignore_reserved=false, bool ignore_obsolete=false)

virtual bool	OnBeginData (const StringRef &data_name)

virtual bool	OnBeginLoop (const StarLoopDesc &header)

virtual void	OnDataRow (const StarLoopDesc &header, const std::vector< StringRef > &columns)

virtual void	OnDataItem (const StarDataItem &item)

virtual void	OnEndData ()

void	SetCompoundLib (const conop::CompoundLibPtr &lib)

int	GetImportedCount ()

Public Member Functions inherited from StarParser
	StarParser (std::istream &stream, bool items_as_row=false)

	StarParser (const String &filename, bool items_as_row=false)

virtual	~StarParser ()

virtual void	OnEndLoop ()

Real	TryGetReal (const StringRef &data, const String &name) const

Real	GetRealOrDefault (const StringRef &data, const String &name, Real alt, bool(*is_default)(StringRef)) const

float	TryGetFloat (const StringRef &data, const String &name) const

std::pair< bool, float >	TryGetFloat (const StringRef &data, const String &name, bool may_fail) const

int	TryGetInt (const StringRef &data, const String &name) const

std::pair< bool, int >	TryGetInt (const StringRef &data, const String &name, bool may_fail) const

bool	TryGetBool (const StringRef &data, const String &name) const

String	FormatDiagnostic (StarDiagType type, const String &message, int line=-1) const

void	SetFilename (const String &filename)

int	GetCurrentLinenum () const

void	Parse ()

	StarParser (std::istream &stream, bool items_as_row=false)

	StarParser (const String &filename, bool items_as_row=false)

virtual	~StarParser ()

virtual void	OnEndLoop ()

Real	TryGetReal (const StringRef &data, const String &name) const

Real	GetRealOrDefault (const StringRef &data, const String &name, Real alt, bool(*is_default)(StringRef)) const

float	TryGetFloat (const StringRef &data, const String &name) const

std::pair< bool, float >	TryGetFloat (const StringRef &data, const String &name, bool may_fail) const

int	TryGetInt (const StringRef &data, const String &name) const

std::pair< bool, int >	TryGetInt (const StringRef &data, const String &name, bool may_fail) const

bool	TryGetBool (const StringRef &data, const String &name) const

String	FormatDiagnostic (StarDiagType type, const String &message, int line=-1) const

void	SetFilename (const String &filename)

int	GetCurrentLinenum () const

void	Parse ()

Additional Inherited Members
Static Public Member Functions inherited from StarParser
static bool	SplitLine (const StringRef &line, std::vector< StringRef > &parts, bool clear=true)

static bool	IsUndefined (StringRef value)

static bool	SplitLine (const StringRef &line, std::vector< StringRef > &parts, bool clear=true)

static bool	IsUndefined (StringRef value)

Detailed Description

Definition at line 41 of file chemdict_parser.hh.

Constructor & Destructor Documentation

◆ ChemdictParser() [1/2]

ChemdictParser	(	std::istream &	stream,
		conop::Compound::Dialect	dialect,
		bool	ignore_reserved = `false`,
		bool	ignore_obsolete = `false`
	)

inline

Definition at line 43 of file chemdict_parser.hh.

◆ ChemdictParser() [2/2]

ChemdictParser	(	std::istream &	stream,
		conop::Compound::Dialect	dialect,
		bool	ignore_reserved = `false`,
		bool	ignore_obsolete = `false`
	)

inline

Definition at line 43 of file chemdict_parser.hh.

Member Function Documentation

◆ GetImportedCount() [1/2]

int GetImportedCount ( )

inline

Get the number of compounds that were successfully parsed.

Definition at line 71 of file chemdict_parser.hh.

◆ GetImportedCount() [2/2]

int GetImportedCount ( )

inline

Get the number of compounds that were successfully parsed.

Definition at line 71 of file chemdict_parser.hh.

◆ OnBeginData() [1/2]

virtual bool OnBeginData ( const StringRef & data_name )

virtual

invoked when a new data control structure is encountered

Returns: When true, for each data-item belonging to the data block, OnDataItem() is invoked. For every loop, OnBeginLoop() is called.

Reimplemented from StarParser.

◆ OnBeginData() [2/2]

virtual bool OnBeginData ( const StringRef & data_name )

virtual

invoked when a new data control structure is encountered

Returns: When true, for each data-item belonging to the data block, OnDataItem() is invoked. For every loop, OnBeginLoop() is called.

Reimplemented from StarParser.

◆ OnBeginLoop() [1/2]

virtual bool OnBeginLoop ( const StarLoopDesc & header )

virtual

called when a loop is encountered

Returns: When true, for each row in the loop, OnDataRow() is returned. If false, the loop is skipped.

Reimplemented from StarParser.

◆ OnBeginLoop() [2/2]

virtual bool OnBeginLoop ( const StarLoopDesc & header )

virtual

called when a loop is encountered

Returns: When true, for each row in the loop, OnDataRow() is returned. If false, the loop is skipped.

Reimplemented from StarParser.

◆ OnDataItem() [1/2]

virtual void OnDataItem ( const StarDataItem & item )

virtual

invoked when a data item is encountered

Reimplemented from StarParser.

◆ OnDataItem() [2/2]

virtual void OnDataItem ( const StarDataItem & item )

virtual

invoked when a data item is encountered

Reimplemented from StarParser.

◆ OnDataRow() [1/2]

virtual void OnDataRow	(	const StarLoopDesc &	header,
		const std::vector< StringRef > &	columns
	)

virtual

invoked when a data row in a loop is encountered.

Parameters

header	describes the row format
columns	contains the data columns

Reimplemented from StarParser.

◆ OnDataRow() [2/2]

virtual void OnDataRow	(	const StarLoopDesc &	header,
		const std::vector< StringRef > &	columns
	)

virtual

invoked when a data row in a loop is encountered.

Parameters

header	describes the row format
columns	contains the data columns

Reimplemented from StarParser.

◆ OnEndData() [1/2]

virtual void OnEndData ( )

virtual

called when leaving a datasection. Will only be invoked when OnBeginData() returned true.

Reimplemented from StarParser.

◆ OnEndData() [2/2]

virtual void OnEndData ( )

virtual

called when leaving a datasection. Will only be invoked when OnBeginData() returned true.

Reimplemented from StarParser.

◆ SetCompoundLib() [1/2]

void SetCompoundLib ( const conop::CompoundLibPtr & lib )

inline

Definition at line 65 of file chemdict_parser.hh.

◆ SetCompoundLib() [2/2]

void SetCompoundLib ( const conop::CompoundLibPtr & lib )

inline

Definition at line 65 of file chemdict_parser.hh.

The documentation for this class was generated from the following file:

build-2.9.0-doc/stage/include/ost/io/chemdict_parser.hh

Public Member Functions

Additional Inherited Members

Detailed Description

Constructor & Destructor Documentation

◆ ChemdictParser() [1/2]

◆ ChemdictParser() [2/2]

Member Function Documentation

◆ GetImportedCount() [1/2]

◆ GetImportedCount() [2/2]

◆ OnBeginData() [1/2]

◆ OnBeginData() [2/2]

◆ OnBeginLoop() [1/2]

◆ OnBeginLoop() [2/2]

◆ OnDataItem() [1/2]

◆ OnDataItem() [2/2]

◆ OnDataRow() [1/2]

◆ OnDataRow() [2/2]

◆ OnEndData() [1/2]

◆ OnEndData() [2/2]

◆ SetCompoundLib() [1/2]

◆ SetCompoundLib() [2/2]