ost.mol.alg.scoring Namespace Reference

Data Structures
class	lDDTBSScorer
class	Scorer

Functions
	_GetAlignedResidues (aln, s1_ent, s2_ent)

Function Documentation

_GetAlignedResidues()

_GetAlignedResidues (   aln,   s1_ent,   s2_ent  )

protected

 Yields aligned residues

:param aln: The alignment with 2 sequences defining a residue-by-residue
            relationship.
:type aln: :class:`ost.seq.AlignmentHandle`
:param s1_ent: Structure representing first sequence in *aln*. 
               One chain must be named after the first sequence and the
               number of residues must match the number of non-gap
               characters.
:type s1_ent: :class:`ost.mol.EntityHandle`/:class:`ost.mol.EntityView`
:param s2_ent: Same for second sequence in *aln*.
:type s2_ent: :class:`ost.mol.EntityHandle`/:class:`ost.mol.EntityView`

Definition at line 25 of file scoring.py.