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entity_io_pdb_handler.hh
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1//------------------------------------------------------------------------------
2// This file is part of the OpenStructure project <www.openstructure.org>
3//
4// Copyright (C) 2008-2020 by the OpenStructure authors
5//
6// This library is free software; you can redistribute it and/or modify it under
7// the terms of the GNU Lesser General Public License as published by the Free
8// Software Foundation; either version 3.0 of the License, or (at your option)
9// any later version.
10// This library is distributed in the hope that it will be useful, but WITHOUT
11// ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS
12// FOR A PARTICULAR PURPOSE. See the GNU Lesser General Public License for more
13// details.
14//
15// You should have received a copy of the GNU Lesser General Public License
16// along with this library; if not, write to the Free Software Foundation, Inc.,
17// 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA
18//------------------------------------------------------------------------------
19#ifndef OST_IO_ENTITY_IO_PLUGIN_PDB_H
20#define OST_IO_ENTITY_IO_PLUGIN_PDB_H
21
22/*
23 Authors: Ansgar Philippsen, Marco Biasini
24 */
25#include <vector>
26
28
29namespace ost { namespace io {
30
31
33public:
34 virtual void Import(mol::EntityHandle& ent,
35 const boost::filesystem::path& loc);
36
37 virtual void Export(const mol::EntityView& ent,
38 const boost::filesystem::path& loc) const;
39
40 virtual void Import(mol::EntityHandle& ent, std::istream& stream);
41
42 virtual void Export(const mol::EntityView& ent, std::ostream& stream) const;
43
44 static bool ProvidesImport(const boost::filesystem::path& loc,
45 const String& format="auto");
46 static bool ProvidesExport(const boost::filesystem::path& loc,
47 const String& format="auto");
48 virtual bool RequiresProcessor() const;
49
50 static String GetFormatName() { return String("Pdb"); }
51 static String GetFormatDescription() { return String("Protein Data Bank file format"); }
52};
53
54
56
57
58}} // ns
59
60#endif
pure abstract base class for entity io handlers
static bool ProvidesImport(const boost::filesystem::path &loc, const String &format="auto")
static bool ProvidesExport(const boost::filesystem::path &loc, const String &format="auto")
virtual void Export(const mol::EntityView &ent, const boost::filesystem::path &loc) const
virtual void Import(mol::EntityHandle &ent, const boost::filesystem::path &loc)
virtual void Export(const mol::EntityView &ent, std::ostream &stream) const
virtual bool RequiresProcessor() const
virtual void Import(mol::EntityHandle &ent, std::istream &stream)
Protein or molecule.
definition of EntityView
#define DLLEXPORT_OST_IO
std::string String
Definition base.hh:54
EntityIOHandlerFactory< EntityIOPDBHandler > EntityIOPDBHandlerFactory
Definition base.dox:1