OpenStructure
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#include <io_manager.hh>
Public Member Functions | |
EntityIOHandlerP | FindEntityImportHandler (const String &filename, const String &format="auto") |
EntityIOHandlerP | FindEntityExportHandler (const String &filename, const String &format="auto") |
void | RegisterFactory (const EntityIOHandlerFactoryBaseP &) |
void | RegisterFactory (const SequenceIOHandlerFactoryBasePtr &) |
void | RegisterFactory (const SurfaceIOHandlerFactoryBasePtr &) |
const EntityIOHFList & | GetAvailableEntityHandler () const |
const AlignmentIOFList & | GetAvailableAlignmentHandler () const |
const SurfaceIOFList & | GetAvailableSurfaceHandler () const |
Alignment/Sequence IO | |
SequenceIOHandlerPtr | FindAlignmentImportHandler (const String &filename, const String &format="auto") |
SequenceIOHandlerPtr | FindAlignmentExportHandler (const String &filename, const String &format="auto") |
SurfaceIOHandlerPtr | FindSurfaceImportHandler (const String &filename, const String &format="auto") |
Static Public Member Functions | |
static IOManager & | Instance () |
Central registry for input/output handlers.
Definition at line 48 of file io_manager.hh.
SequenceIOHandlerPtr FindAlignmentExportHandler | ( | const String & | filename, |
const String & | format = "auto" |
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SequenceIOHandlerPtr FindAlignmentImportHandler | ( | const String & | filename, |
const String & | format = "auto" |
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get sequence io handler that is able to import the given file.
EntityIOHandlerP FindEntityExportHandler | ( | const String & | filename, |
const String & | format = "auto" |
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get entity IO handler that is able to export the file.
EntityIOHandlerP FindEntityImportHandler | ( | const String & | filename, |
const String & | format = "auto" |
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SurfaceIOHandlerPtr FindSurfaceImportHandler | ( | const String & | filename, |
const String & | format = "auto" |
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const AlignmentIOFList& GetAvailableAlignmentHandler | ( | ) | const |
Get a list with all available AlignmentHandler.
const EntityIOHFList& GetAvailableEntityHandler | ( | ) | const |
Get a list with all available EntityHandler.
const SurfaceIOFList& GetAvailableSurfaceHandler | ( | ) | const |
Get a list with all available SurfaceHandler.
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static |
void RegisterFactory | ( | const EntityIOHandlerFactoryBaseP & | ) |
register entity io handler factory
void RegisterFactory | ( | const SequenceIOHandlerFactoryBasePtr & | ) |
register aligment io handler factory
void RegisterFactory | ( | const SurfaceIOHandlerFactoryBasePtr & | ) |
register surface io handler factory