SecStructure Struct Reference

#include <sec_structure.hh>

Public Types
enum	Type {   ALPHA_HELIX = 'H', PI_HELIX = 'I', THREE_TEN_HELIX = 'G', TURN = 'T',   EXTENDED = 'E', BETA_BRIDGE = 'B', BEND = 'S', COIL = 'C' }

Public Member Functions
	SecStructure (char type)
	SecStructure (Type type)
	SecStructure ()
bool	operator== (const Type &rhs) const
bool	operator== (const SecStructure &rhs) const
bool	operator!= (const Type &rhs) const
bool	operator!= (const SecStructure &rhs) const
bool	IsHelical () const
bool	IsExtended () const
bool	IsCoil () const
	operator char () const

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Detailed Description

Secondary structure types as defined by DSSP. For convenience, the enum values match the characters used in the DSP file format.

Definition at line 29 of file sec_structure.hh.

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Member Enumeration Documentation

enum Type

Enumerator:

ALPHA_HELIX
PI_HELIX
THREE_TEN_HELIX
TURN
EXTENDED
BETA_BRIDGE
BEND
COIL

Definition at line 30 of file sec_structure.hh.

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Constructor & Destructor Documentation

SecStructure ( char  type )

inlineexplicit

Definition at line 40 of file sec_structure.hh.

SecStructure ( Type  type )

inlineexplicit

Definition at line 41 of file sec_structure.hh.

SecStructure ( )

inline

Definition at line 42 of file sec_structure.hh.

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Member Function Documentation

bool IsCoil ( ) const

inline

Definition at line 72 of file sec_structure.hh.

bool IsExtended ( ) const

inline

Definition at line 67 of file sec_structure.hh.

bool IsHelical ( ) const

inline

Definition at line 62 of file sec_structure.hh.

operator char ( ) const

inline

Definition at line 76 of file sec_structure.hh.

bool operator!= ( const Type &  rhs ) const

inline

Definition at line 53 of file sec_structure.hh.

bool operator!= ( const SecStructure &  rhs ) const

inline

Definition at line 57 of file sec_structure.hh.

bool operator== ( const Type &  rhs ) const

inline

Definition at line 43 of file sec_structure.hh.

bool operator== ( const SecStructure &  rhs ) const

inline

Definition at line 48 of file sec_structure.hh.

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The documentation for this struct was generated from the following file:

• stage/include/ost/mol/sec_structure.hh