- a -

• AllAtomEnergies : AllAtomPotential

- b -

• base_type : Vec3List

- c -

• C1 : Histogram< T1, T2, T3, T4, T5, T6, T7 > , MultiClassifier< V, T1, T2, T3, T4, T5, T6, T7 >
• C2 : MultiClassifier< V, T1, T2, T3, T4, T5, T6, T7 > , Histogram< T1, T2, T3, T4, T5, T6, T7 >
• C3 : Histogram< T1, T2, T3, T4, T5, T6, T7 > , MultiClassifier< V, T1, T2, T3, T4, T5, T6, T7 >
• C4 : MultiClassifier< V, T1, T2, T3, T4, T5, T6, T7 > , Histogram< T1, T2, T3, T4, T5, T6, T7 >
• C5 : Histogram< T1, T2, T3, T4, T5, T6, T7 > , MultiClassifier< V, T1, T2, T3, T4, T5, T6, T7 >
• C6 : Histogram< T1, T2, T3, T4, T5, T6, T7 > , MultiClassifier< V, T1, T2, T3, T4, T5, T6, T7 >
• C7 : Histogram< T1, T2, T3, T4, T5, T6, T7 > , MultiClassifier< V, T1, T2, T3, T4, T5, T6, T7 >
• circular_iterator : Polygon2
• ClassType : SequenceListIterator< T, I >
• const_circular_iterator : Polygon2
• const_iterator : PodVector< T > , StringRef
• const_reference : PodVector< T >
• const_reverse_iterator : PodVector< T >
• ConstIterator : SequenceListImpl
• ConstRefType : Classifier< impl::NullType > , Classifier< int > , Classifier< Real >
• container_type : VectorAdditions< Container >

- e -

• EntryType : BondTable< ATOM >

- i -

• IndexType : IndexIterator< D > , MultiClassifier< V, T1, T2, T3, T4, T5, T6, T7 > , TorsionStatistics , TorsionStatisticsSolis
• ItemList : SpatialOrganizer< ITEM, VEC >
• iterator : SequenceList , SequenceHandle , ConstSequenceHandle , AlignmentHandle , AlignedRegion , PodVector< T >
• Iterator : SequenceListImpl
• iterator : ConstSequenceList
• Iterator : ConstSequenceList , MultiClassifier< V, T1, T2, T3, T4, T5, T6, T7 > , AminoAcidSet , SequenceList
• iterator : StringRef
• iterator_type : IterRange< I >
• IteratorType : SequenceListIterator< T, I >

- m -

• MapType : BondTable< ATOM >

- n -

• NamePair : ConnResEntry

- p -

• PackingEnergies : PackingPotential
• PairSet : ConnResEntry

- r -

• reference : PodVector< T >
• RefType : Classifier< int > , Classifier< impl::NullType > , Classifier< Real >
• reverse_iterator : PodVector< T >

- t -

• TorsionEnergies : TorsionPotentialSolis , TorsionPotential
• TorsionEntryList : ConnResEntry
• TorsionHistogram : TorsionStatisticsSolis , TorsionStatistics
• Type : If< false, T, F > , If< true, T, F > , Classifier< int > , Classifier< impl::NullType > , Classifier< Real > , IfNull< C, T, F >

- v -

• value_type : VectorAdditions< Container > , IterRange< I > , StringRef , PodVector< T >
• ValueType : SequenceListIterator< T, I > , MultiClassifier< V, T1, T2, T3, T4, T5, T6, T7 >

- w -

• WeightType : SubstWeightMatrix