Here is a list of all struct and union fields with links to the structures/unions they belong to:
- a -
- A
: Units
- A3MToCS()
: HHblits
- A3MToProfile()
: HHblits
- a_ci_
: PointlistOverlayBase
- a_cr_
: PointlistOverlayBase
- a_settings_
: PointlistOverlayBase
- a_sq_
: PointlistOverlayBase
- aa_dict
: ContactWeightMatrix
, PairSubstWeightMatrix
- aa_list
: ContactWeightMatrix
, PairSubstWeightMatrix
- aa_rendering_cb_
: LineTraceWidget
, SimpleWidget
, SlineWidget
, WireframeWidget
- aalines_flag_
: GfxObj
- ABFAC
: Prop
- About()
: InitMenuBar
- accept()
: FileTypeDialog
- acceptor
: HBond
- acceptors
: HBondableAtoms
- ACHARGE
: Prop
- Acquire()
: AdminRights
- action
: SurfaceContextMenu
, SecStructContextMenu
, AlignmentContextMenu
- actions_
: ToolBarOptionsWidget
- Activate()
: Shader
, Tool
- ActivateOverlay()
: OverlayManager
- ActivateTool()
: ToolBar
- active_
: MaskOverlay
- active_color
: PointlistOverlayBaseSettings
- active_color_
: PointlistOverlayBase
- active_color_b_
: PointlistOverlayBaseSettings
- active_state_
: StateMachine
- ActiveNodesChanged()
: SceneWin
, InspectorWidget
- ActiveToolChanged()
: GLWin
, ToolManager
- Add()
: PresetEditor
, PresetWidget
, AminoAcidSet
, GfxNode
, FastSphereRenderer
, Scene
, IndexedVertexArray
, PointlistOverlay
, ToolOptionEnum
, WidgetPool
, InfoSet
, StarLoopDesc
, PDBize
, SpatialOrganizer< ITEM, VEC >
, Distances
, Dist2Mean
, GradientEdit
, GradientPresetWidget
- add_
: GradientEdit
- add_action
: GradientPresetWidget
, PresetWidget
- add_angles
: Settings
- add_barostat
: Settings
- add_bonds
: Settings
- add_button_
: GradientPresetWidget
, PresetEditor
, PresetWidget
- add_cmaps
: Settings
- add_dihedrals
: Settings
- add_exclusions
: Settings
- add_gbsa
: Settings
- add_impropers
: Settings
- add_mode_
: MaskOverlay
- add_nonbonded
: Settings
- add_scalar()
: ImageStateImpl< T, D >
- add_thermostat
: Settings
- AddAction()
: ContextMenu
, ToolBar
- AddAddRule()
: GromacsBlockModifier
- AddAlignedSeq()
: MMCifInfoStructRef
- AddAlignment()
: SequenceViewer
- AddAllInclusiveBonds()
: EntityView
- AddAltAtomPos()
: EditorBase
, ResidueImpl
- AddAngle()
: BuildingBlock
, Forcefield
, GromacsBlockModifier
- AddAssembly()
: LinearIndexer
- AddAtom()
: Compound
, Diag
, GfxView
, ChainView
, EntityView
, BuildingBlock
, ResidueView
- AddAtomInternal()
: EntityView
- AddAtomRenamingRule()
: Forcefield
- AddAuthorsToCitation()
: MMCifInfo
- AddBioUnit()
: MMCifInfo
- AddBlockModifier()
: Forcefield
- AddBond()
: Compound
, GfxView
, AtomView
, EntityView
, BuildingBlock
, Forcefield
, GromacsBlockModifier
- AddBuildingBlock()
: Forcefield
- AddButton()
: ButtonBox
- AddButtonBox()
: ButtonBar
- AddCallback()
: Progress
- AddChain()
: EntityView
, Diag
, SequenceViewObject
, MMCifInfoBioUnit
- AddCharacters()
: LinearCharacterContainer
- AddChild()
: SceneNode
- AddCitation()
: MMCifInfo
- AddCMap()
: BuildingBlock
, Forcefield
, GromacsBlockModifier
, Topology
- AddCol()
: Table
- AddColumn()
: ProfileHandle
- AddCommand()
: PythonInterpreterWorker
- AddCompound()
: CompoundLib
- AddConstraint()
: BuildingBlock
, Forcefield
- AddContext()
: PythonContext
- AddCyl()
: PrimList
- AddCylinder()
: IndexedVertexArray
- AddDefault()
: InfoHandle
- AddDeleteAtom()
: GromacsBlockModifier
- AddDiag()
: Diagnostics
- AddDif()
: MMCifInfoStructRefSeq
- AddDihedral()
: BuildingBlock
, Forcefield
, GromacsBlockModifier
- AddDisplayMode()
: BaseViewObject
- AddDistance()
: DistanceMap
- AddDistanceConstraint()
: Topology
- AddDockWidget()
: MainWindow
- AddEntity()
: SequenceViewer
- addError()
: _XMLTestResult
- AddExclusion()
: BuildingBlock
, Topology
- addFailure()
: _XMLTestResult
- AddFGMDHBondAcceptor()
: Topology
- AddFGMDHBondDonor()
: Topology
- AddFrame()
: CoordGroupHandle
, CoordSource
, InMemCoordSource
- AddFrames()
: CoordGroupHandle
- AddGradientToInfo()
: GradientListModel
- AddHarmonicAngle()
: Topology
- AddHarmonicBond()
: Topology
- AddHarmonicDistanceRestraint()
: Topology
- AddHarmonicImproper()
: Topology
- AddHarmonicPositionRestraint()
: Topology
- AddHydrogenConstructor()
: Forcefield
- AddHydrogenRule()
: GromacsHydrogenConstructor
- AddIcoSphere()
: IndexedVertexArray
- AddImplicitGenborn()
: Forcefield
- AddImproper()
: BuildingBlock
, Forcefield
, GromacsBlockModifier
- AddInt()
: Diag
- AddItem()
: GradientListModel
, PresetEditorListModel
, PresetListModel
- AddLabel()
: GfxObj
- AddLF()
: IsosurfaceGenerator
- AddLine()
: PrimList
, IndexedVertexArray
- AddLJ()
: Forcefield
- AddLJPair()
: Forcefield
, Topology
- AddMass()
: Forcefield
- AddMesh()
: PrimList
- AddMMCifEntityIdTr()
: MMCifInfo
- AddMMCifPDBChainTr()
: MMCifInfo
- AddNode()
: Polygon2
, SceneWinModel
, PolygonMask
- AddNodeEntryList()
: BackboneTrace
- AddObserver()
: RenderOptions
- AddOp()
: Preset
- AddOperation()
: MMCifInfo
- AddOperations()
: MMCifInfoBioUnit
- AddOption()
: ToolOptionGroup
, ToolOptions
- AddOverlay()
: DataViewer
, OverlayManager
- addParticle()
: DensityForce
- AddPDBMMCifChainTr()
: MMCifInfo
- AddPeriodicDihedral()
: Topology
- AddPeriodicImproper()
: Topology
- AddPersistentWidget()
: MainArea
- AddPoint()
: PointCloud
, PrimList
- AddPointCloud()
: PointCloudManager
- AddPositionConstraint()
: Simulation
, Topology
- AddPositionConstraints()
: Simulation
- AddPositions()
: LinearPositionContainer
- AddPresetToInfo()
: PresetListModel
- AddProfile()
: ProfileDB
- AddQuad()
: IndexedVertexArray
- AddReplaceRule()
: GromacsBlockModifier
- AddResidue()
: Diag
, ChainView
, EntityView
- AddResidueRenamingRule()
: Forcefield
- AddRevision()
: MMCifInfoRevisions
, MMCifInfo
, MMCifInfoRevisions
, MMCifInfo
- AddRow()
: Table
- AddSecondaryConnector()
: AtomImpl
- AddSequence()
: SequenceList
, SequenceViewObject
, AlignmentHandle
, SequenceListImpl
, ConstSequenceList
- AddSink()
: MultiLogSink
- AddSphere()
: PrimList
, IndexedVertexArray
- addState()
: StateMachine
- AddStop()
: GradientEdit
- AddString()
: Diag
- AddText()
: PrimList
- AddToken()
: PythonContext
- AddTool()
: ToolManager
- AddTorsion()
: EditorBase
, EntityImpl
, ResidueImpl
- AddTrajectory()
: TrajWidget
- addTransition()
: State
- AddTri()
: IndexedVertexArray
, SurfaceImpl
, SurfaceHandle
- AddTriN()
: IndexedVertexArray
- AddUreyBradleyAngle()
: Topology
- AddVertex()
: SurfaceImpl
, SurfaceHandle
- AddView()
: EntityRenderer
, SceneWin
- AddViewMode()
: PanelBar
- AddWidget()
: MainArea
, PanelBar
, PanelManager
, ComboOptionsWidget
, ToolBarOptionsWidget
- AddWidgetByName()
: PanelManager
- AddWidgetToApp()
: GostyApp
- AddWidgetToPool()
: PanelManager
- AdjacencyBitmap()
: AdjacencyBitmap
- AdjustPhaseOrigin()
: ImageStateImpl< T, D >
- AdminRights()
: AdminRights
- AdvanceProgress()
: Progress
- AINDEX
: Prop
- AlgorithmBase()
: AlgorithmBase
- Align()
: AlignmentContextMenu
- align_properties_painter
: SequenceViewObject
- aligned_contacts
: iAlignResult
- aligned_length
: TMAlignResult
, MMAlignResult
- aligned_patches
: BlastHit
- aligned_residues
: iAlignResult
- AlignedColumn()
: AlignedColumn
- AlignedColumnIterator()
: AlignedColumnIterator
- AlignedCuboid()
: AlignedCuboid
- AlignedRegion()
: AlignedRegion
- alignment
: TMAlignResult
, iAlignResult
, cluster
, MMAlignResult
, MappedLDDTScorer
- ALIGNMENT
: RefMode
- AlignmentChanged()
: SequenceTableView
, SequenceViewer
- AlignmentHandle
: ConstSequenceHandle
, SequenceHandle
, AlignmentHandle
- AlignmentOpts()
: AlignmentOpts
- alignments
: OligoLDDTScorer
, QSscorer
- AlignmentViewObject()
: AlignmentViewObject
- AlignPropertiesPainter()
: AlignPropertiesPainter
- all_chains
: ChainComboBox
- AllCleared()
: MessageWidget
- aln
: AlignedPatch
, HHblitsHit
- Alpha()
: Color
- ALPHA_HELIX
: SecStructure
- ALPHABET_SIZE
: SubstWeightMatrix
- alt_name
: AtomSpec
- ALWAYSTRUE
: EditPositionGuard
- amb_occl_factor
: SceneFX
- amb_occl_flag
: SceneFX
- amb_occl_mode
: SceneFX
- amb_occl_quality
: SceneFX
- amb_occl_size
: SceneFX
- AMBER
: Compound
- AMINOACIDS
: ChemType
- AminoAcidSet()
: AminoAcidSet
- AminoAcidSetIterator()
: AminoAcidSetIterator
- ANAME
: Prop
- ANCHORBIGGER
: EditPositionGuard
- ANCHOREQUAL
: EditPositionGuard
- ANCHORSMALLER
: EditPositionGuard
- ANGL
: Measurement
- angle
: FindMemParam
- angle_
: Phase
- angle_table
: StereoChemicalProps
- AnisotropicFilter()
: AnisotropicFilter
- anisou
: AtomProp
- antecedent_list
: HBondAcceptor
- ANUM
: Prop
- Append()
: SequenceImpl
, SequenceHandle
- AppendCode()
: TextLogger
- AppendColorOp()
: GfxObj
- AppendCommand()
: ShellHistory
- AppendCommandlineArgument()
: PythonInterpreter
- AppendError()
: PythonShellWidget
- AppendModulePath()
: PythonInterpreter
- AppendOutput()
: PythonShellWidget
, TextLogger
- AppendResidue()
: EditorBase
, ChainImpl
- Apply()
: ExtentMask
, Surface
, CircleMask
, Scene
, ConnectRendererBase
, EntityRenderer
, ConnectRendererBase
, Rotation3
, Transform
, ResidueHandle
, Entity
, GfxNode
, GfxObj
, ConnectRendererBase
, EntityRenderer
, TraceRendererBase
, Scene
, ResidueView
, Selection
, Surface
, Transformation
, AtomView
, ResidueImpl
, CompositeMask
, ConstData
, Data
, ImageHandle
, AtomImpl
, EntityImpl
, ImageHandle
, ConstImageHandle
, ConnectorImpl
, ChainView
, ImageList
, ImageStateBase
, ResidueView
, TorsionImpl
, BondHandle
, ChainView
, EntityView
, ImageStateBase
, ImageStateImpl< T, D >
, AtomView
, ImageStateImpl< T, D >
, InfoHandle
, InfoGroup
, PolygonMask
, ChainHandle
, ImageHandle
, ImageStateImpl< T, D >
, InfoHandle
, MaskBase
, NullData
, InfoGroup
, SphericalMask
, AtomHandle
, BondHandle
, InvertedMask
, EntityHandle
, EntityView
, ChainImpl
, ImageStateImpl< T, D >
, TorsionHandle
, ImageStateBase
, ConstImageHandle
, ImageList
, ConstImageHandle
, ImageList
- ApplyAxisRotation()
: Transform
- ApplyInverse()
: Transform
- ApplyIP()
: ConstImageHandle
, ImageHandle
, ImageStateBase
, ImageList
, NullData
, ImageStateBase
, ImageList
, ImageHandle
, ImageStateImpl< T, D >
, ImageHandle
, ConstData
, Data
, ImageHandle
, ImageList
, ImageStateImpl< T, D >
- ApplyLBFGS()
: Simulation
- ApplyOn()
: RenderOp
, Preset
, VisibilityOp
- ApplyOnBuildingBlock()
: TerminiConstructor
, HeuristicHydrogenConstructor
, HeuristicBlockModifier
, GromacsHydrogenConstructor
, BlockModifier
, HydrogenConstructor
, GromacsBlockModifier
- ApplyOnResidue()
: TerminiConstructor
, BlockModifier
, GromacsHydrogenConstructor
, HeuristicHydrogenConstructor
, GromacsBlockModifier
, HydrogenConstructor
, HeuristicBlockModifier
- ApplyOptions()
: RenderModeWidget
, Entity
- ApplyRenderOptions()
: CartoonRenderOptions
, CustomRenderOptions
, RenderOptions
, CPKRenderOptions
, LineRenderOptions
, TraceRenderOptions
, SlineRenderOptions
- ApplySD()
: Simulation
- ApplyShiftToMask()
: MaskOverlay
- ApplyTo()
: BasicGradientColorOp
, ByChainColorOp
, ColorOp
, UniformColorOp
, MapHandleColorOp
, ByElementColorOp
, GradientLevelColorOp
, EntityViewColorOp
, MapHandleColorOp
- ApplyTransform()
: CoordGroupHandle
, EntityImpl
, CoordSource
, XCSEditor
- ApplyXAxisRotation()
: Transform
- ApplyXAxisTranslation()
: Transform
- ApplyYAxisRotation()
: Transform
- ApplyYAxisTranslation()
: Transform
- ApplyZAxisRotation()
: Transform
- ApplyZAxisTranslation()
: Transform
- arc_spinbox_
: TubeWidget
, CustomWidget
, TraceWidget
, HSCWidget
- AreResiduesConsecutive()
: Processor
- Argand()
: Argand
- As()
: ImageFormatBase
- AsBool()
: InfoItem
- AsFloat()
: InfoItem
- AsImage()
: SimilarityMatrix
- AsInt()
: InfoItem
- Assign()
: GenericPropContainerImpl
- assign_elem
: MolckSettings
- AssignFFSpecificNames()
: Forcefield
- AssignGromacsNaming()
: Modeller
- AssignPDBNaming()
: Modeller
- AssignPreset()
: SubstWeightMatrix
- AssignSecondaryStructure()
: ChainImpl
, SecStructContextMenu
, ChainHandle
- AssignSecStructure()
: MMCifReader
- AsString()
: ResNum
- AsVector()
: InfoItem
- At()
: Hyperbola2
, Line3
, Mat2
, Vec3
, Mat4
, Mat3
, Vec3
, Vec2
- at()
: ProfileHandle
- At()
: Vec4
- at()
: ProfileHandle
- At()
: Plane
, Vec4
, Vec2
, Point
, Mat3
, Ellipse2
, Line2
, Mat4
, Point
, Mat2
- AtAngle()
: Ellipse2
- AtEnd()
: RowSet< R >
, LineIterator
, IndexIterator< D >
, ExtentIterator
, ShellHistory
, IndexIterator
- atom
: HBondAcceptor
- Atom()
: Builder
- atom
: AtomGroupEntry
, NodeEntry
- ATOM
: Prop
- atom
: SurfaceVertex
, AtomEntry
- atom1
: BondEntry
- atom2
: BondEntry
- atom_a
: Contact
- atom_b
: Contact
- atom_map
: GfxView
- atom_one
: BondSpec
- atom_two
: BondSpec
- AtomBase()
: AtomBase
- AtomEntry()
: AtomEntry
- AtomGroupEntry()
: AtomGroupEntry
- AtomHandle()
: AtomHandle
- AtomImpl()
: AtomImpl
- AtomProp()
: AtomProp
- AtomRenamingType
: Forcefield
- atoms
: BondTableEntry< ATOM >
, AtomGroup
- AtomSpec()
: AtomSpec
- AtomView()
: AtomView
, EntityView
- AtStart()
: IndexIterator
, ExtentIterator
- Attach()
: Observable
, ConstImageHandle
, ImageHandle
, SurfaceHandle
, SurfaceImpl
, OverlayManager
, SurfaceImpl
, ConstData
, SurfaceHandle
, NullData
- AttachGfxObject()
: SequenceViewObject
- AttachObserver()
: EntityImpl
, Scene
, SceneObserverImpl
, EntityHandle
- AttachRenderModeObserver()
: SceneWinModel
- AttachView()
: AlignmentHandle
, SequenceHandle
, AlignmentHandle
, SequenceImpl
, SequenceHandle
- auto_
: ClipWidget
- auto_calc_
: GradientLevelColorOpWidget
- AutoAutoslab()
: Scene
- AutoCorrelateFnc()
: AutoCorrelateFnc
- automatic_transitions_
: State
- AutomaticTransition()
: AutomaticTransition
- Autoslab()
: Scene
- AutoslabMax()
: Scene
- available
: PooledWidget
- awake_
: PythonInterpreterWorker
- AX
: Prop
- axis
: FindMemParam
- AY
: Prop
- AZ
: Prop