SequenceIOHandler Class Reference

pure abstract base class for entity io handlers More...

#include <sequence_io_handler.hh>

Inherited by ClustalIOHandler, ClustalIOHandler, FastaIOHandler, FastaIOHandler, PirIOHandler, PirIOHandler, PromodIOHandler, and PromodIOHandler.

Public Member Functions

virtual ~SequenceIOHandler ()
virtual void Import (seq::SequenceList &sequences, const boost::filesystem::path &loc)=0
virtual void Export (const seq::ConstSequenceList &ent, const boost::filesystem::path &loc) const =0
virtual void Import (seq::SequenceList &ent, std::istream &instream)=0
virtual void Export (const seq::ConstSequenceList &ent, std::ostream &ostream) const =0
virtual ~SequenceIOHandler ()
virtual void Import (seq::SequenceList &sequences, const boost::filesystem::path &loc)=0
virtual void Export (const seq::ConstSequenceList &ent, const boost::filesystem::path &loc) const =0
virtual void Import (seq::SequenceList &ent, std::istream &instream)=0
virtual void Export (const seq::ConstSequenceList &ent, std::ostream &ostream) const =0

Detailed Description

pure abstract base class for entity io handlers

Definition at line 33 of file sequence_io_handler.hh.


Constructor & Destructor Documentation

virtual ~SequenceIOHandler (  )  [inline, virtual]

Definition at line 35 of file sequence_io_handler.hh.

virtual ~SequenceIOHandler (  )  [inline, virtual]

Definition at line 35 of file sequence_io_handler.hh.


Member Function Documentation

virtual void Export ( const seq::ConstSequenceList ent,
std::ostream &  ostream 
) const [pure virtual]
virtual void Export ( const seq::ConstSequenceList ent,
const boost::filesystem::path &  loc 
) const [pure virtual]
virtual void Export ( const seq::ConstSequenceList ent,
std::ostream &  ostream 
) const [pure virtual]
virtual void Export ( const seq::ConstSequenceList ent,
const boost::filesystem::path &  loc 
) const [pure virtual]
virtual void Import ( seq::SequenceList ent,
std::istream &  instream 
) [pure virtual]
virtual void Import ( seq::SequenceList sequences,
const boost::filesystem::path &  loc 
) [pure virtual]
virtual void Import ( seq::SequenceList ent,
std::istream &  instream 
) [pure virtual]
virtual void Import ( seq::SequenceList sequences,
const boost::filesystem::path &  loc 
) [pure virtual]

The documentation for this class was generated from the following files:
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Generated on 6 Dec 2017 for OpenStructure by  doxygen 1.6.1